|
Name : VV1_0767 (VV1_0767) Accession : NP_759746.2 Strain : Genome accession: NC_004459 Putative virulence/resistance : Virulence Product : accessory colonization factor AcfD Function : - COG functional category : - COG ID : - EC number : - Position : 767121 - 771674 bp Length : 4554 bp Strand : - Note : - DNA sequence : TTGAAACGAAGCCTTTTGTCGCTTTTGATTGCTTCTATGCTAGTGGCTTGTGGCAGTGAAGATCGAGTACTTGCACCCGT TCTCCCTCCAACGGTTGAACCAGAGCTGCCCGATATTGGGGTTGATGACCCGATCATCGTCAGCGCCTTATCTTTGGATG GGCATTTGATGTTGAGTGGTTCGATTGAGTGTAATGGTGGGCCAGCAAATCAGTTCGATGTTCCTCAAAAAGAGGATGTC GTGTGCATGGTGCAAGGTCGCACACTTGCAACCTTCACAACCCCATACGTTGCGGAACAAACTCGCAGTCGTGCCGTCAA TGTGGAAGTCTTGTCGCTGGCTCAAGCCGATGAATACAAAGCTTCACCAGTACGCTTGAGCAATATTCAAACGCTGATTA AAAACATCGGTAGCACTCAGGGCAATACAATAGAGCTGGATTTGTCTTCGTCACGCGATGCGCTCACGTTCGAACATTAT TTTGACCACAACCTAGATATGCCTGTTGATGAGTTTCGAGCGTTGATCACCGAGAAAGTGAGCAATGATAACCAAGTGGA TAAGCAGCCTACAACGCACGTGCCCGATGTTCCACCGGCGGTGACGCCTGGCGCATCGAGTGACTTAACGAGTGGTTTTG TGTCAGCAAGTGCTGAAGAGTCTCTGGTTTATAAACCGAGCGAAGTTATCTTAACTCAAGCACAGTTGCTTAATGAGCAA GGTTTGCCTGTCAATGGTATTGCGTATTTCAGTGCTCATGGTCGAGGTGTCACTGGAGTCGATAAGCAAGGAAATATGAT CGGTGATGGCCGCTTTGAATTCTCTTGGGGCGAAAACATCAGTTTTGCTATCGATACGTTTGAACTGGGTGAGATACGTG GCAACAAAACGGCCTTCCAGCTAACAGAACTTGCTCAAGGAAATGAGGGGAAAAACGTTGAAAAACTGGTGCATCGTTAT GCCGACCGTACTGACAGTAAAGTAACGCTTCCTCAACAAGTCACGGAGGTTTTTGCCCTCTATCCGAACGTGGTCAATGA AGCGATCTCTTTGTCGCTTAATAGTGATGATACGTTACTTGACGTGGGGGGAGGTCAAACGCAACTGGTTCCGGGTGAAT TTGAACAGCAATTTGCTCATGGTCTCGCTGCGGATATCGATCAACAGCTCGCCAAGCCATCTGCTCGCTCTAACTTTGAG CTGCCAGTGGTTAAAGGCGCACTCGATCCGCAAGCAAGCCGCATTCAAGCGGATATCCAAAAACTTTGGGGGGCTACTCA CCAAGTGCAGCAAGCCGGATGGAAAAAAGTAGAACGTTTCCATGTGTTCCATGACAGTACCAACTTCTACGGGAGTACAG GTAATGCACGTGGCCAGGCGGCGGTGAATATTGCCAATAGCGCGTTTCCGGTCATGATGGCTCGTAACGACAACAATTAC TGGATCGACTTTGGTCAACCGAAAGCTTGGGATGCGCAAGGTCTGGCATTTATCACCGAAGCCCCTTCTTCTGTTGTGCC AGAAAAAGTGTCGGCGGAAACGGCGACCTTCAATCTGCCTTTCATGAGCATTGGTGAGTTGGGCAAAGGCAAAGTGATGG TGATGGGCAACGCGCGCTACAACAGTGTGTTGGTTTGCCCGAATGGCTTTAGTTGGAATGGCGGGGTGAATCAAGATGGC TCGTGTAAGCAATCCAGCGACACTGACGACATGGCAAACTTCTTTGCTAACACGCTGCGTTATTTAACCGGCAAATCAGC GCAAGAGCTGACGGTTGGCACCAATATTCCTTATGTCTACTTTAAGCGTCATGGTCAAGTGATGGGCGAGCGGGCCGATT TTGTTATCGACCCTCGTTTAGCGGCTAAAACGGAGCAACTCTCTGATTTTGGCTATCTTGACCCTGAAGCGATGCCCGTT GTGATCATCAATGGGTATGAGTATTTAGGTCATGCGGGTATCGGCGCTTACGATCTGCCAATGAGTGCCAATATCAATAA GCCTAAATTGAGCCAGCAAGATGTCTCGGATCTCATCGACTACGTGAATCGTGGTGGCAATGTTTTGATGATGGAAACCA TCATCAATCGTGCTAACGCGGGTGAAGTTGCTCGGCTACTCGATAGTGCTGGCATCGCGTTTGGCATGGGGCAAAGTGTG GTGCCAAATGGCAATGGACCAAGTGGCGGTTATCCTGATCGCCCGCGCAATCAGCGTCAGCACGGTATTTGGGTATTGGA GCGCTATGCGGCGGTACAAGGCGCGGATGGTAAACCAGTATTGCCGTACACCATTAACGACGATGGTTCGGTTGAGTGGC AATATCAAGTAGAAGGCAAGCCAGACGATAAACCCAATCTAGAGATCGCACGTTGGCCTGAGTTGGATGAGCATGGCGAG CCAAAACTGGATAAAGATGGCAACCCGATCATTAACGTCGCCTTTATTGATGAATCACAGCATTGGCGCAAAGATAAAGA GGGCCATGTGGTTGTCGATGAACATCAACAGCCTATATTGGATCAAGACAGCCTTGCCAAGGCAAAGCAACGTATTTTGA ACGCTTTCTTGGTAGACGGAGAACCCGCTTATCAAGAGTGTCACGATAGCCAATTTCATTATGAAGTGAACTGTTTGGAA TACCGCCCAGGGAACGGCATACCCACTGGTGGGGGTATGCATGTGCCTCATTACACTGAGCTCAAACTTGGTGAAGCTGA ATCGCAAGCCATGGTGAAAGCGGCTAACTTAGGGACCAATATTGAGGCGCTGTATCAGCATGAGCGCTATTTCCGTACCA AAGGGAAAGTGGGTGAGCGTCTAAGCAGTGTTGATCTCAACCGTATTTACCAGAATATGACGGTTTGGCTATGGAACGAC CTCGATTATCGCTACGAATCAAGCAGTGAGGATGAGTTAGGTTTCCAGCGTTTTACCCAATTCTTAAACTGTTACACCAA TGATGTGGCAGGCGGTAATACCCATTGCCCAGAAGAGGTGAAATCTGAATTGAACCGGTTGAACATGGTCTATGGTGATG AGGCTGGTGAGTATGCCGGTCAAATGAACCCTAGCTACCCGCTCAACTATATGGAAAAACCGTTAACCCGATTAATGCTT GGTCGCTCTTTTTGGGATTTAGACATCAAGGTGGATGTCCGTGCATTCCCCGGAGAAGCAGGTGAAGGGGCGGGTGGCCG CAATGTTACTTTGGATATGCGTAATTTGACGACCGCATGGTTTGCGGGCAACCGTCAGCCAACAGGGCAGTGGGCGGTCG CGCAGCAGCCGTTTACGGTATCGGTGGCTGGGGAGGAAGCGCCCGTCACTATCACTATCGCTTTGGCGGATGATTTAACT GGTCGCGAAAAACATGAGCTTGGTTTGCAGCGCCCGCCAAGAATGACCAAGTCGTTCGTCATTGGTGGCAGCCATGCCAC AAGTCAGCAGTTTACCGTTCCTTATGGTGGTTTGATTTATGCCCAAGGTGGCAATAGCGAGCAAGTGAGCTTAACGTTTA CTGGCACGGTCGATGCGCCTCTGTATAAACAGGGCAAATGGCAAAATCCACTGAGCTCTCCTGCGCCAATGGGTGAGGTG ATTTCAGATACCTTTATCTTTACTGCCCCGAAAGCAAACTTAAATGCTTCTGGTTACTCTGGTGGTATCGAACAGTTCGC CCGGGATCTCGATCGTTTTTCGGCGGATCTCAATGATTTTTACGCTCGCGATGAAGGGGTTGAAGGGCGCTTAAATCGTC AAGCGACCAGTCCAAGTAATCCTAATAATCGCCATCACTTTGTAAATGATGTTGCGATCAGTATTGGCGCGGCTCACTCT GGTTACCCAGTGATGAATGGGAGCTTTAATGCTAAGAGCCAAAGTCTAAATACAGCGCCACTGAACAGCTGGCTGTTATG GCATGAGGTTGGACATAACGCCGCAGAGGCACCGTTTAATGTAGATGGCGCAACGGAAGTGGTGAATAACCTACTGGCGT TGTACATGCAGGATCAGTACTTAGGAAAAATGGCGCGCGTTGAGCAAGATATCCGAATCGCGCCAGATTTTGTGCGTATG GAGAATGGCTATGCATGGGGCGCGGGCGGTGCGGGTGAACGCTTAGTGATGTTTGCACAACTGAAAGAGTGGGCTGAGAA TGAATTTGATATTCAGCAGTGGTATGGCGATGAGTTGCCAAGTTACTACAGCTCAAAAGAAGGGGTCACAGGGTGGAACC TCTTTAAGTTAATGCATCGATTAACGCGTAATAAGACTGAGGGTTTGTCTGAGCTAAAAGGTGAGAACATATGCCAAGCG TCAGGGTTTGGAAAGAGTGACATGTTGATGCTTTGCGCCTCTTATGCGGCTCAAACGGATCTGAGTGCTTTCTTCCAAGC GTGGAATCCGGGGTCTAAAGCGTTTCTCTACCCAGGTGACCCAACACCAAGGTATGAAGGCGGGATTACGCAAAGTGGGC TAGACAAGGTGAAAGAGCTCAAGTTGCCTAAGCCACAACGTGATCCATTAGCGATAAATCAGTTATCAAGATAA Protein sequence : MKRSLLSLLIASMLVACGSEDRVLAPVLPPTVEPELPDIGVDDPIIVSALSLDGHLMLSGSIECNGGPANQFDVPQKEDV VCMVQGRTLATFTTPYVAEQTRSRAVNVEVLSLAQADEYKASPVRLSNIQTLIKNIGSTQGNTIELDLSSSRDALTFEHY FDHNLDMPVDEFRALITEKVSNDNQVDKQPTTHVPDVPPAVTPGASSDLTSGFVSASAEESLVYKPSEVILTQAQLLNEQ GLPVNGIAYFSAHGRGVTGVDKQGNMIGDGRFEFSWGENISFAIDTFELGEIRGNKTAFQLTELAQGNEGKNVEKLVHRY ADRTDSKVTLPQQVTEVFALYPNVVNEAISLSLNSDDTLLDVGGGQTQLVPGEFEQQFAHGLAADIDQQLAKPSARSNFE LPVVKGALDPQASRIQADIQKLWGATHQVQQAGWKKVERFHVFHDSTNFYGSTGNARGQAAVNIANSAFPVMMARNDNNY WIDFGQPKAWDAQGLAFITEAPSSVVPEKVSAETATFNLPFMSIGELGKGKVMVMGNARYNSVLVCPNGFSWNGGVNQDG SCKQSSDTDDMANFFANTLRYLTGKSAQELTVGTNIPYVYFKRHGQVMGERADFVIDPRLAAKTEQLSDFGYLDPEAMPV VIINGYEYLGHAGIGAYDLPMSANINKPKLSQQDVSDLIDYVNRGGNVLMMETIINRANAGEVARLLDSAGIAFGMGQSV VPNGNGPSGGYPDRPRNQRQHGIWVLERYAAVQGADGKPVLPYTINDDGSVEWQYQVEGKPDDKPNLEIARWPELDEHGE PKLDKDGNPIINVAFIDESQHWRKDKEGHVVVDEHQQPILDQDSLAKAKQRILNAFLVDGEPAYQECHDSQFHYEVNCLE YRPGNGIPTGGGMHVPHYTELKLGEAESQAMVKAANLGTNIEALYQHERYFRTKGKVGERLSSVDLNRIYQNMTVWLWND LDYRYESSSEDELGFQRFTQFLNCYTNDVAGGNTHCPEEVKSELNRLNMVYGDEAGEYAGQMNPSYPLNYMEKPLTRLML GRSFWDLDIKVDVRAFPGEAGEGAGGRNVTLDMRNLTTAWFAGNRQPTGQWAVAQQPFTVSVAGEEAPVTITIALADDLT GREKHELGLQRPPRMTKSFVIGGSHATSQQFTVPYGGLIYAQGGNSEQVSLTFTGTVDAPLYKQGKWQNPLSSPAPMGEV ISDTFIFTAPKANLNASGYSGGIEQFARDLDRFSADLNDFYARDEGVEGRLNRQATSPSNPNNRHHFVNDVAISIGAAHS GYPVMNGSFNAKSQSLNTAPLNSWLLWHEVGHNAAEAPFNVDGATEVVNNLLALYMQDQYLGKMARVEQDIRIAPDFVRM ENGYAWGAGGAGERLVMFAQLKEWAENEFDIQQWYGDELPSYYSSKEGVTGWNLFKLMHRLTRNKTEGLSELKGENICQA SGFGKSDMLMLCASYAAQTDLSAFFQAWNPGSKAFLYPGDPTPRYEGGITQSGLDKVKELKLPKPQRDPLAINQLSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 67 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 65 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 65 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 65 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 65 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 65 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 65 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 65 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 65 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 64 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 64 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 64 |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VV1_0767 | NP_759746.2 | accessory colonization factor AcfD | VFG0106 | Protein | 0.0 | 65 |
