Gene Information

Name : xerD (VV1_0530)
Accession : NP_759521.1
Strain :
Genome accession: NC_004459
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 531122 - 532039 bp
Length : 918 bp
Strand : -
Note : COG4974

DNA sequence :
ATGCAACAAACGGCATCGGTTAATATGCAAGATTTTGGCTACGTAGAGCAATTTCTCGATGCGATGTGGATGGAGCGAGG
CCTCGCAGAGAATACGTTGGCCTCTTACCGCAACGATCTGATGAAGTTATTGCAGTGGATGGAGGCGAATCATTATCGGC
TCGATTTCATCAGCCTGTCTGGGCTTCAGCAATACCAAAGCTATTTGGTGGATCAAGACTACAAGCAGACTTCAAGAGCA
CGGATGTTGTCAGCGATTCGTCGTCTGTTTCAATATCTTCATCGAGAAAAAGTGCGCGCCGATGATCCTAGTGCCCTATT
GGTCAGCCCTAAATTACCGCAACGTTTGCCAAAAGACATCAGTGAAGAGCAGGTCGATGCGTTATTGGATGCGCCCGATC
CGAATGATCCGGTGGAACTGCGTGACAAAGCCATGCTTGAGCTACTGTATGCCACGGGATTGCGTGTTACCGAGCTGGTG
AGTTTAACCATGGAAAACATCAGCTTGCGTCAAGGTGTGGTGCGGGTGACGGGTAAAGGTGGCAAAGAGCGCTTAGTGCC
CATGGGGGAAAATGCCATCGACTGGATCGAAACCTTTATCAAACAAGGTCGTCCGGCGTTATTGGGTGAAACCTCTTCGG
ATGTGGTGTTTCCAAGTAAGCGTGCCAGACAAATGACCAGACAAACCTTTTGGCATCGCATCAAGTTCTATGCGGTGATT
GCAGGTATCGATACTGATCATTTGTCACCACACGTTTTGAGGCACGCTTTCGCCACCCATTTATTGAACTATGGGGCCGA
TCTCAGGGTCGTACAGATGCTGCTTGGTCATAGTGACTTATCGACCACGCAAATTTATACTCACGTGGCAACAGAACGAC
TAAAACAGATTCATAGCCAACATCATCCGCGTGCTTAA

Protein sequence :
MQQTASVNMQDFGYVEQFLDAMWMERGLAENTLASYRNDLMKLLQWMEANHYRLDFISLSGLQQYQSYLVDQDYKQTSRA
RMLSAIRRLFQYLHREKVRADDPSALLVSPKLPQRLPKDISEEQVDALLDAPDPNDPVELRDKAMLELLYATGLRVTELV
SLTMENISLRQGVVRVTGKGGKERLVPMGENAIDWIETFIKQGRPALLGETSSDVVFPSKRARQMTRQTFWHRIKFYAVI
AGIDTDHLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQIHSQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-56 57
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-56 57