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Name : clpB (VV1_0482) Accession : NP_759474.1 Strain : Genome accession: NC_004459 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 477717 - 480290 bp Length : 2574 bp Strand : - Note : COG0542 DNA sequence : ATGCGTCTTGATCGATTTACCAGCAAATTTCAAATCGCTATCTCTGATGCACAATCATTGGCGTTAGGGCGCGATCATCA ATACATTGAACCTGTTCACTTAATGGTGGCGCTGCTTGATCAAAACGGCAGCCCTATTCGTCCACTGCTGACCATCTTAA ATGTGGATGTCACTCACCTACGTTCAAAACTCAGCGAAATGCTGGATCGTTTGCCCAAAGTGAGCGGTATTGGTGGTGAT GTACAGCTCTCCTCAGCCATGGGCGCGATGTTTAACTTGTGCGATAAGATTGCACAAAAACGCCAAGATGCTTACATCTC ATCTGAAATCTTTTTGCTCGCAGCAATCGAAGATAGAGGACCACTTGGCCAGCTCTTCAAAGAACTTGGCTTAACTGAAC AGAAAGTGAGTCAAGCTATCGAGCAAATTCGCGGTGGTCAAAAAGTGAATGATCAAAATGCGGAAGAACTTCGCCAAGCG TTAGAGAAATTTACCATTGATCTGACGGAACGTGCAGAACAGGGCAAACTTGACCCTGTGATTGGACGTGACGATGAAAT TCGTCGCACCATCCAAGTATTGCAGCGTCGAACCAAAAACAACCCCGTGATCATTGGTGAGCCAGGTGTTGGTAAAACCG CCATTGTTGAAGGTTTAGCACAACGTATCATCAATAACGAGGTGCCCGAAGGTCTGCGTGGTCGCCGAGTATTGTCACTC GATATGGGCGCGTTGGTGGCTGGAGCGAAGTACCGTGGTGAATTTGAAGAGCGACTTAAATCGGTATTGAATGAGTTGTC TAAAGAAGAAGGCAATATCATCCTCTTTATTGATGAGCTTCATACCATGGTTGGCGCCGGTAAAGGTGAAGGGTCGATGG ATGCGGGCAATATGCTCAAACCCGCATTGGCACGTGGTGAGTTACATTGTGTGGGCGCAACGACACTTGATGAGTATCGT CAGTATATCGAGAAAGATCCGGCACTTGAGCGCCGCTTCCAAAAAGTGCTGGTTGATGAACCAACAGTGGAAGACACCAT TGCAATTTTGCGTGGTTTAAAAGAACGCTATGAGCTGCATCATCATGTTGAAATTACCGATCCAGCGATCGTTGCTGCGG CCAGTTTGTCGCATCGCTATGTTTCTGATCGTCAATTACCGGACAAAGCGATCGACCTCATCGACGAAGCCGCATCCAGT ATTCGCATGCAGATCGATTCTAAACCCGAAGCTTTGGATAAGTTGGAGCGCAAAATCATCCAACTTAAGATAGAGCAGCA GGCGCTGAGTAATGAACACGATGAAGCGAGTGAAAAACGTCTGCGCTCACTTAACGAAGAGTTGAATGAGAAAGAGCGTG AGTTTGCTGAGTTAGAGGAAATTTGGAATGCGGAAAAAGCCGCGCTGTCTGGCACTCAGCATATTAAAGCGGCGTTAGAG CAAGCACGCATGGATATGGAGTTTGCAAGACGAGCGGGGGATCTTAGCCGCATGTCTGAGCTTCAATATGGCCGTATTCC AGAGCTTGAGAAGCAACTTGACCTAGCAACGCAAGCAGAAATGCAGGAAATGACCTTGTTGAAAAACAAAGTCACCGATA ATGAAATTGCGGAAGTGCTTTCCAAGCAAACGGGTATCCCTGTTTCCAAAATGCTTGAAGCAGAAAAAGAAAAACTACTT CGCATGGAAGAGGTGCTGCATAAACGCGTTATTGGGCAGAAAGAGGCGGTGGAAGTTGTTGCGAATGCAATACGTCGCAG CCGCGCGGGTTTGTCCGATCCCAATAAGCCGATTGGTTCGTTCTTATTCTTAGGTCCAACCGGTGTGGGGAAAACGGAAC TGTGCAAAACGTTGGCGAATTTCATGTTCGACAGTGAAGATGCCATGGTGCGTATCGACATGTCCGAGTTTATGGAGAAA CACTCAGTGGCACGCTTAGTCGGTGCACCTCCTGGCTATGTGGGTTATGAAGAAGGTGGTTACTTAACGGAAGCCGTTCG ACGTAAGCCTTATTCAGTGATTTTGCTCGACGAGGTGGAAAAGGCGCATCCTGATGTGTTCAACATCCTGCTGCAAGTCT TGGATGATGGTCGATTGACGGATGGACAAGGTAGAACAGTGGATTTCCGCAATACCGTGGTCATCATGACATCAAACCTA GGCTCCAGCCGCATCCAAGAAAACTTCGCTATGTTGGATTACCAAGGCATCAAAGAACAGGTGATGGAAGTGGTGACCAA GCACTTCAGGCCGGAGTTTTTGAACCGTGTTGATGAGACAGTGGTCTTCCACCCACTTGGTCAAGACCATATTAAGTCGA TCGCAGCGATTCAACTTAACCGCTTGGCGAATCGCATGGAAGAGCATGGCTATCCGTTGGAAGTGTCTGATAAAGCGCTC GAATTGATCGCACAAGTTGGTTTTGACCCGGTTTACGGAGCAAGACCATTGAAACGAGCGATTCAGCAAAGTATCGAAAA CCCGCTGGCGAAATCTATTTTGGCAGGTTCAGTGCTACCGGATAAGAAAATACAGCTTATCGTCAACAACGACCAAATTG TGGCACACCAATAG Protein sequence : MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTILNVDVTHLRSKLSEMLDRLPKVSGIGGD VQLSSAMGAMFNLCDKIAQKRQDAYISSEIFLLAAIEDRGPLGQLFKELGLTEQKVSQAIEQIRGGQKVNDQNAEELRQA LEKFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL DMGALVAGAKYRGEFEERLKSVLNELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASS IRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIKAALE QARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLKNKVTDNEIAEVLSKQTGIPVSKMLEAEKEKLL RMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEK HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL GSSRIQENFAMLDYQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPLEVSDKAL ELIAQVGFDPVYGARPLKRAIQQSIENPLAKSILAGSVLPDKKIQLIVNNDQIVAHQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-163 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | NP_759474.1 | ATP-dependent chaperone ClpB | VFG0079 | Protein | 2e-139 | 42 |
