Gene Information

Name : ribD (VV1_0323)
Accession : NP_759325.1
Strain :
Genome accession: NC_004459
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 311146 - 312252 bp
Length : 1107 bp
Strand : -
Note : COG0117

DNA sequence :
ATGTCGGAATTTACTGCAATCGATAGACAAATGATGCTGCGCGCCATTGCTTTGGCGAAACGCGGCCTCTATACCACCGC
ACCTAATCCTAATGTTGGTTGTGTCTTACTGCGCGACGGCGAAATTGTCGGAGAAGGTTTTCACTTTCGCGCTGGCGAGC
CTCATGCGGAAGTGCACGCGATGCGCATGGCTGGTGACAAAGCCAAAGGTGCGACCGCTTATGTCACGCTAGAGCCTTGT
TCACACTATGGTCGAACGCCCCCGTGTGCGGAAGGCTTAATTAAAGCTGGGGTAAGCCGAGTGGTGTGTGCAATGGAAGA
CCCAAACCCCCAAGTCGCGGGGAGAGGTTTTGCCATGTTGCGAGAGGCAGGGATCGAGGTATCGGTGGGCCTACTTCAAG
CAGAAGCAGAAGCACTGAATCCTGCTTTTATTAAGCGAATGAAAATGGGCATGCCGTTTGTTCAACTCAAAATGGCCGCG
TCCCTCGATGGTCAAACGGCTTTAGCCAATGGCAAGAGTCAGTGGATCACCTCTCCACAAGCTCGCCGAGATGTGCAACG
TTTTCGGGCGCAATCAGGGGCGATTTTGTCCACCAGTAAAACGGTGCTCGCTGACAATGCGTCTCTTAATGTTCGTTGGT
CCGAGTTACCTTCATCTGTGCAACGCGCTTTACCGCAAGAGCAGCTGCGTCAGCCCACTCGTGTTGTGTTAGACAGACAA
GCCGAGCTTTCGCCGGAGCTAAAACTTTACCAAACCGAGGGTGAGCGACTCATTGTTGGTCCCAAAGGCGATCTCCCTGC
ACCTTTGGATGAGCACGGACAGATCGATTTGCCGCAACTGTTCGCGCAACTGAGTCAAACGCAGTTAATTAACCATCTTT
GGGTTGAAGCGGGAGCAACGCTGGCCGCTGGACTGATAAAACACCAGTTGGTGGACGAACTGATTGTTTACCTTGCCCCA
AAACTGATGGGCAGCGATGGACGTGGATTGATGGGTGCGCTGGGTTTGCAAGCCATGTCGCAAGTGATCGATTTAGACAT
TAAAGATGTGCGAATGGTTGGGCCGGATATCCGCATCATTGCACACATCAAAGCAAAAGAAAGTTGA

Protein sequence :
MSEFTAIDRQMMLRAIALAKRGLYTTAPNPNVGCVLLRDGEIVGEGFHFRAGEPHAEVHAMRMAGDKAKGATAYVTLEPC
SHYGRTPPCAEGLIKAGVSRVVCAMEDPNPQVAGRGFAMLREAGIEVSVGLLQAEAEALNPAFIKRMKMGMPFVQLKMAA
SLDGQTALANGKSQWITSPQARRDVQRFRAQSGAILSTSKTVLADNASLNVRWSELPSSVQRALPQEQLRQPTRVVLDRQ
AELSPELKLYQTEGERLIVGPKGDLPAPLDEHGQIDLPQLFAQLSQTQLINHLWVEAGATLAAGLIKHQLVDELIVYLAP
KLMGSDGRGLMGALGLQAMSQVIDLDIKDVRMVGPDIRIIAHIKAKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 8e-67 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 8e-67 48