Gene Information

Name : VV1_2874 (VV1_2874)
Accession : NP_761681.1
Strain :
Genome accession: NC_004459
Putative virulence/resistance : Resistance
Product : transporter, AcrB/D/F family
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0841
EC number : -
Position : 2939982 - 2943089 bp
Length : 3108 bp
Strand : -
Note : COG0841

DNA sequence :
ATGAGTGATAAACCAGTAGTGTCGCCTCAAAGCGATGATGAAGTAACGGGCGTCGCAGCGTATTTTATTCGAAATCGTGT
GATTAGTTGGATGATTTCGCTGATCTTTTTGATTGGTGGGGTGGCTGCGTTTTTTGGTTTAGGTCGTTTAGAAGATCCGG
CCTTTACCATCAAAGACGCAATGGTGGTGACTTCCTATCCGGGTGCCACACCTCAGCAGGTTGAAGAAGAGGTGACTTAT
CCGCTTGAGAAAGCGATTCAGCAATTAACTTATGTGGATGAGGTTAACTCCATTTCCAGCCGCGGGTTATCTCAAATCAC
TGTGACCATGAAAAACAATTATGGTCCGGATGATCTGCCACAAATCTGGGATGAACTGCGTCGTAAAGTCAACGACCTTA
AAGGTCAGCTTCCTCCCGGAGTGAATGACCCGCAAGTGATTGATGACTTTGGTGATGTGTACGGGATTTTACTTGCAGTC
ACAGGCGATGGTTACAGTTATAAAGAACTGCTGGATTATGTCGATTATTTAAGGCGTGAGCTTGAACTGGTCGATGGGGT
CAGCAAAGTTTCCGTCACTGGACAACAGCAAGAGCAAGTGTTTATCGAGATATCGATGAAGCGTTTAAGTAGCTTAGGTA
TTTCACCAAACACGGTCTTTAACCTGCTTTCGACGCAAAACGTGGTGTCTGACGCTGGTGCGATCCGAATTGGCGATGAA
TACATCCGTATCCATCCTACGGGTGAGTTCCAAAACGTCGATCAGTTGGGCGATCTCATTATTACCGAGAGCGGAGCTCA
GGGATTGATCTATCTTCGCGATGTGGCCGATATCAAACGTGGCTACGTTGAAGTGCCGAACAACATCATCAACTTCAATG
GCAAACTGGCGTTGAACGTCGGGGTTTCTTTTGCACAAGGTGTCAACGTGGTGGAAGTGGGTAAATCCTTCGACCGTCGC
CTAGCTGAACTGAAATACCAGCAACCGGTTGGCATTGATATCTCCGAGATTTATAGCCAACCGAAGGAAGTGGATAAGTC
GGTCAGCGGATTCGTGGTGAGTTTGGGGCAAGCAGTAGCGATTGTTATTATCGTCCTCTTGTTCTTTATGGGTTTGCGCT
CTGGCCTGTTGATTGGTTTGATTTTGCTGCTCACGGTACTGGGTACCTTCATCTTCATGCAGTATTTCAAGATCGACTTG
CAACGTATCTCTCTCGGCGCGTTGGTTATCGCACTGGGGATGCTGGTGGATAACGCCATTGTGGTGGTTGAGGGGATATT
GATTGGCACGCAAAAAGGCCGAACGCGTCTGCAGGCCGCGACCGACATTGTTACGCAAACCAAGTGGCCGCTCCTTGGGG
CGACGGTCATTGCGGTGACCGCGTTTGCTCCTATCGGTCTGTCTGAAGATGCGACAGGTGAATACTGTGGCACTCTCTTT
ACCGTGTTGCTGATTTCTCTGATGCTGAGTTGGTTCACTGCGATTTCTTTAACGCCTTTCTTCGCCGATATTTTCTTTAA
AGGCCAGAAAGTGAATGTGTCAGAATCGGGCGAAGAAGTGGACCCGTATAACGGCATGATCTTCGTGGTATACAAGAACT
TCTTAGAGTTCTGTATGAAGCGAGCTTGGTTGACCATGATCGTGTTGGTGCTGGGTTTAGGCGTCAGTTTGTACGGCTTT
ACATTGGTTAAGCAGGCATTCTTTCCATCGTCGACCACGCCAATGTTCCAAGCCGATATTTGGCTGCCGGAAGGGACGGA
CATTCGCGCGACTAACACCAAGCTTAAAGCGTTGGAAAGCTGGTTAGCCGAACAAGACAATGTCGAGCACATCACGACCA
CAGCGGGTAAGGGTTTGCAGCGTTTCATGCTGACCTACGCACCAGAGAAGAGCTATGCCGCGTATGGTGAAATTACTACG
CGTGTCACCAGCTATGAAGCCCTTGATCCTTTGATGGCGAAATTCCGCCAGCATGTCAAAGAGAACTTCCCTGAGATCAA
CTACAAATTGAAGCAAATTGAGTTAGGTCCAGGCGGTGGTGCGAAGATCGAAGCGCGCATCATCGGTTCGGATCCAACGG
TATTGCGTTCAATTGCCGCTCAGGTGATGGATATCATGTACGCCGATGCAGGGGCAACCAACGTTCGCCACGACTGGCGT
GAACGTACCAAAGTGCTTGAGCCACAGTTTAACGAAAGCCAAGCTAGACGTTACGGCATCACAAAGTCGGATGTGGACGA
TTTCCTTGCCATGTCGTTTTCGGGAATGGCGATTGGTATTTATCGTGATGGCACGACGTTAATGCCGATCGTTGCCCGTT
TACCAGATGAAGAGCGTGTGGATATTCGTAATATCGAAGGGATGAAAATTTGGAGCCCGGCGTTAAGCGAATTCATTCCT
CTTCAACAGGTGACGTTAGGCTATGAATTGCTTTGGGAAGACCCAATTATTGTGCGTAAGAACCGCAAACGCGTGCTGAC
GGTGATGGCTGACCCTGACATTCTTGGTGAAGAGACCGCGTCAACGTTACAGAAACGTTTGATGCCACAAATCGAAGCCA
TTCAACTGCCACCAGGTTACTCTCTGGAATGGGGTGGGGAATATGAATCCTCTCGTGATGCACAAGCGTCGCTCTTTACC
ACCATGCCGATGGGTTACCTGTTTATGTTCTTGATCACTGTGTTCTTGTTTAACTCAGTGAAAGAGCCATTGATCGTTTG
GCTGACGGTGCCTCTAGCGGTGATTGGGGTAACAACTGGCTTGTTAGCGCTCAATACGCCATTTGGTTTTATGGCGTTAC
TCGGCTTCTTAAGCTTGTCTGGCATGCTGTTGAAAAACGGTATCGTATTGCTTGATCAGATCGAAATAGAGATGAAGTCA
GGCAAAGATCCGTATGTTGCGGTTGTGGATGCTGCGTTGAGCCGTGTTCGCCCAGTCTGTATGGCGGCGATCACCACGAT
TCTGGGCATGGTGCCTCTGTTACCCGACATTTTCTTTAAGCCGATGGCAGTCACCATCATGTTTGGTCTGGGTTTTGCGA
CAATCCTGACACTGATTGTCGTGCCAGTGTTGTATCGTCTCTTCCACAAAGTGGCGGTGCCGAAATAA

Protein sequence :
MSDKPVVSPQSDDEVTGVAAYFIRNRVISWMISLIFLIGGVAAFFGLGRLEDPAFTIKDAMVVTSYPGATPQQVEEEVTY
PLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGQLPPGVNDPQVIDDFGDVYGILLAV
TGDGYSYKELLDYVDYLRRELELVDGVSKVSVTGQQQEQVFIEISMKRLSSLGISPNTVFNLLSTQNVVSDAGAIRIGDE
YIRIHPTGEFQNVDQLGDLIITESGAQGLIYLRDVADIKRGYVEVPNNIINFNGKLALNVGVSFAQGVNVVEVGKSFDRR
LAELKYQQPVGIDISEIYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLILLLTVLGTFIFMQYFKIDL
QRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYCGTLF
TVLLISLMLSWFTAISLTPFFADIFFKGQKVNVSESGEEVDPYNGMIFVVYKNFLEFCMKRAWLTMIVLVLGLGVSLYGF
TLVKQAFFPSSTTPMFQADIWLPEGTDIRATNTKLKALESWLAEQDNVEHITTTAGKGLQRFMLTYAPEKSYAAYGEITT
RVTSYEALDPLMAKFRQHVKENFPEINYKLKQIELGPGGGAKIEARIIGSDPTVLRSIAAQVMDIMYADAGATNVRHDWR
ERTKVLEPQFNESQARRYGITKSDVDDFLAMSFSGMAIGIYRDGTTLMPIVARLPDEERVDIRNIEGMKIWSPALSEFIP
LQQVTLGYELLWEDPIIVRKNRKRVLTVMADPDILGEETASTLQKRLMPQIEAIQLPPGYSLEWGGEYESSRDAQASLFT
TMPMGYLFMFLITVFLFNSVKEPLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEMKS
GKDPYVAVVDAALSRVRPVCMAAITTILGMVPLLPDIFFKPMAVTIMFGLGFATILTLIVVPVLYRLFHKVAVPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 0.0 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VV1_2874 NP_761681.1 transporter, AcrB/D/F family BAC0519 Protein 0.0 91
VV1_2874 NP_761681.1 transporter, AcrB/D/F family BAC0428 Protein 0.0 88
VV1_2874 NP_761681.1 transporter, AcrB/D/F family BAC0526 Protein 0.0 58
VV1_2874 NP_761681.1 transporter, AcrB/D/F family BAC0425 Protein 0.0 42