Gene Information

Name : VV1_2401 (VV1_2401)
Accession : NP_761248.2
Strain :
Genome accession: NC_004459
Putative virulence/resistance : Unknown
Product : Integron integrase IntI4
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2438314 - 2439276 bp
Length : 963 bp
Strand : -
Note : COG0582

DNA sequence : 
ATGAAAAATCAGTTTATTTTAAGTGTTCAAGATCATATGCGAACTCGACACTATGCCACAAAAACGATTCAGGCTTACAT
CAGTTGGATTAAACAGTACATCTATTTCCATAGGATGGCACATCCGTCTACATTGAATGAGAAACATGTTGAAGAATTTT
TAACCCACCTCGCTGTTGAACAAAAAGTTGCCGCAAAGACACAAGCACTTGCATTAAACTCCGTTCTATTTCTCTATCGG
GAATATTTCAGAACACCGCTTAATAATGAAATTAAGTTTCAGAAGTCTCTACTCGATAGAAAATTGCCAGTTGTGTTGAC
CAAGCCAGAGCTTCGTGCATTTATTCAACATATAGATCCAAGATATAAACTTCATATTATGCTGTTATATGGCTCTGGAT
TAAGAGTTATGGAGTGCGTTCGTCTTAGAATCCAGGATGTTGATTACCATTATGGAGCACTAAGAGTTTGGCAAGGCAAG
GGAGGGAAAAACCGCACTGTTACACTCGCTAAGGAGTTATATCCCCTCTTGAAAGAGCAAGAGGCATTAGCACTACGTTA
TTATCAAAAAGACAGAATTACTGCGGGTTACGCCGGCGTTTGGTTATCGTCTTCTCTGCAAAGAAAATACCAAGGAGCCG
AAATGGATTTCAACTGGCACTATTTATTCCCATCCGATAGGTTATCAAGAGATCCAGAGTCCGATTTACTCAGAAGACAT
CACATCAACGAGCAAGCTCTTCAAAGGGCCGTAAAGAGAGCGGCAAAAGATGCTGGAATTACCAAGTCCATAAGTTGCCA
CACGCTGAGACATAGCTTTGCAACACACTTACTTGAGTCCGGCGCCGATATTAGAACCGTACAAGAACAGCTAGGCCATT
CTGACGTTAAAACCACCCAGATATACACTCATGTATTAGAAAGAGGTGCGGGCGGAGTCCTAAGCCCTCTATCTAAGCTT
TAG

Protein sequence : 
MKNQFILSVQDHMRTRHYATKTIQAYISWIKQYIYFHRMAHPSTLNEKHVEEFLTHLAVEQKVAAKTQALALNSVLFLYR
EYFRTPLNNEIKFQKSLLDRKLPVVLTKPELRAFIQHIDPRYKLHIMLLYGSGLRVMECVRLRIQDVDYHYGALRVWQGK
GGKNRTVTLAKELYPLLKEQEALALRYYQKDRITAGYAGVWLSSSLQRKYQGAEMDFNWHYLFPSDRLSRDPESDLLRRH
HINEQALQRAVKRAAKDAGITKSISCHTLRHSFATHLLESGADIRTVQEQLGHSDVKTTQIYTHVLERGAGGVLSPLSKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 9e-43 46
int1 YP_005160012.1 integrase Not tested Not named Protein 3e-47 45
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 1e-57 45
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 6e-57 45
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 7e-57 45
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 1e-57 45
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 3e-57 45
intI1 AAK02045.1 integrase Not tested SGI1 Protein 6e-57 45
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 1e-57 45
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 3e-57 45
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 6e-57 45
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 3e-57 45
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 1e-57 45
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 1e-57 45
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 6e-57 45
intI YP_001844881.1 integrase Not tested AbaR20 Protein 2e-57 45
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 1e-57 45
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 6e-57 45
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 2e-57 45
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 1e-57 45
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 6e-57 45
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 2e-57 45
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 1e-57 45
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 6e-57 45
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 2e-57 45
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 1e-57 45
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 6e-57 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VV1_2401 NP_761248.2 Integron integrase IntI4 VFG1028 Protein 4e-57 45