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Name : c0978 (c0978) Accession : NP_752908.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Unknown Product : regulator of late gene expression Function : - COG functional category : R : General function prediction only COG ID : COG3500 EC number : - Position : 940864 - 941964 bp Length : 1101 bp Strand : + Note : Residues 15 to 364 of 366 are 56.52 pct identical to residues 15 to 381 of 389 from SwissProt.40 : >sp|P21679|VPD_BP186 LATE CONTROL GENE D PROTEIN (GPD) DNA sequence : GTGAATTTCAGCTCTGAACTGCTTAACAAAGGCAACAAAACTCCGGCATTCAGCATCAGTATTGAGGGCAGGGATATCAC TACTGTGCTGGATAACAGCCTGATGAGTCTGACGCTGACGGACAATCGGGGCTTTGAAGCAGACCAGCTTGATCTGGAGC TGGACGACGCCGACGGAAAAATCGTGCTGCCGCGCCGTGGTGCGGTCATTACGCTGGCGCTGGGTTGGAAGGGGCAGCCG CTTTTCCCTAAAGGGGCATTCACGGTGGACGAGATTGAACATACTGGCGCACCGGACCGCCTGACTATCCGGGCGCGAAG TGCTGATTTTCGTGAAACGCTGAATATCCGCCGTGAAAAGTCGTGGCACAAGACCACCGTTGGGGAAGTGGTGAAGGAAA TAGCTGCGCGGCACAAACTGAAGATGGCATTGGGTGAAGACCTGTCGGATAAACCTGTGGAGCATATAGACCAGACCAAT GAGAGTGACGGCAGTTTTCTGATGCGGCTGGCGCGCCAGTACGGTGCTATTGCGTCGGTGAAAAATGGCAATCTGTTATT CATCCGGCAGGGACAGGGTAAAAGCGCCAGCGGTAAACCACTACCGATTATCACTATCACACGTAAGGACGGCGACAGTC ACCGCTTTACCCTGGCAGATCGCGGAGCCTACACGGGCGTAATTGCCAGCTGGTTGCATACCCGCGAACCCGCGAAGAAA GAAAGCACCACGGTGAAGCGTAAGCGCAGGACTAAGAAGCAGAAGAAAGAGCCGGAAGCGAAGCAGGGCGATTACCTGGT GGGTACAGATGAAAACGTGCTGGTACTTAATCGCACCTATGCCAACCGGAGCAACGCCGAACGGGCGGCGAAAATGCAGT GGGAACGCCTGCAACGTGGCGTTGCGTCATTCTCGCTACAACTGGCAGAAGGTCGGGCGGATCTCTACACGGAAATGCCA GTGAAAGTCAGAGGCTTTAAACAGCCGATAGATGATGCGGAATGGACTATTACCACCCTGACGCATACTGTCAATCCGGA TAACGGTTTTACGACCAGTCTGGAGCTTGAAGTGAAGATTAATGATTTCGAAATGGAATGA Protein sequence : MNFSSELLNKGNKTPAFSISIEGRDITTVLDNSLMSLTLTDNRGFEADQLDLELDDADGKIVLPRRGAVITLALGWKGQP LFPKGAFTVDEIEHTGAPDRLTIRARSADFRETLNIRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKPVEHIDQTN ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPIITITRKDGDSHRFTLADRGAYTGVIASWLHTREPAKK ESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVLNRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMP VKVRGFKQPIDDAEWTITTLTHTVNPDNGFTTSLELEVKINDFEME |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4601 | NP_458684.1 | putative regulator of late gene expression | Not tested | SPI-7 | Protein | 8e-138 | 86 |
| t4295 | NP_807892.1 | regulator of late gene expression | Not tested | SPI-7 | Protein | 8e-138 | 86 |
| unnamed | ABR13490.1 | phage late control D | Not tested | PAGI-6 | Protein | 7e-54 | 42 |
