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Name : c0952 (c0952) Accession : NP_752882.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Unknown Product : major capsid protein Function : - COG functional category : - COG ID : - EC number : - Position : 924530 - 925588 bp Length : 1059 bp Strand : + Note : Residues 1 to 352 of 352 are 58.82 pct identical to residues 1 to 357 of 357 from SwissProt.40 : >sp|P25477|VPN_BPP2 MAJOR CAPSID PROTEIN PRECURSOR (GPN) DNA sequence : ATGAAGAAGAATACCCGCTTTGCTTTTAACGCTTACCTGCAGCAGCTGGCGCGTCTGAACGGTGTGGCAGTTGAAGAACT GTCCAGCAAGTTCACTGTAGAGCCGTCTGTACAGCAGACGCTGGAAGACCAGATCCAGCAGTCCGCCGCTTTCCTGACGC TGATTAACGTCACGCCAGTGACTGAGCAGTCTGGTCAGTTGCTGGGGCTGGGTGTTGGCAGCACCATTGCCGGAACCACT GACACCACCGCGAAAGAGCGTGAGCCTGTCGATCCGACGCTGATGGTTGATGTGGAATATAAATGCGAGCAGACCAACTT TAACACGGTGCTGACCTACGCGAAGCTGGACCTGTGGGCGAAGTTTCAGGATTTCCAGGTGCGCATCCGTGACGCCATCG TGAAACGTCAGGCTCTGGACCGCATAATGATCGGCTTTAACGGCGTGAAGCGTGCGAAAACCTCCAACCGTAGCGAAAAC CCGCTGCTGCAGGATGTGAACAAAGGCTGGCTGCAGAAAATCCGTGAAGATGCACCGGATCACGTCATGGGCAGCACCAC CACGGGCGGTGAAACCACACCGGGTGCGGTGAAAGTCGGGAAAGGTGGCGAATATGCCAACCTGGACGCAGTGGTGATGG ATGCAGTCAATGAGCTTATCGACGTGGTCTACCAGGACGATGACGATCTGGTGGTGATTTGCGGTCGTGAACTGCTGTCT GACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGAAAACAGTGAAAAACTGGCTGCCGATATGATCATCAGTCAGAAGCG CATGGGGGGCCTGCAGGCCGTGCGTGCGCCGTTCTTCCCGCCGAATGCGCTGCTGATCACCCGTCTGGATAACCTGTCCA TTTACTGGCAGGAGGACACCCGCCGCCGTTCGGTTATCGACAACCCGAAACGTGACCGGATTGAAAACTTTGAATCCGTT AACGAAGCCTATGTGGTTGAGGACTACCGCTGCGCAGCACTGGTGGAAAACATCCAGATTGGCGACTTCAGCGCCGCCGC CGCAGAAGCCGGAGCATAA Protein sequence : MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTT DTTAKEREPVDPTLMVDVEYKCEQTNFNTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNELIDVVYQDDDDLVVICGRELLS DKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRAPFFPPNALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESV NEAYVVEDYRCAALVENIQIGDFSAAAAEAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 1e-129 | 92 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 1e-129 | 92 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 3e-71 | 53 |
