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Name : c0950 (c0950) Accession : NP_752880.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Unknown Product : capsid scaffolding protein Function : - COG functional category : - COG ID : - EC number : - Position : 923686 - 924513 bp Length : 828 bp Strand : + Note : Residues 3 to 275 of 275 are 46.42 pct identical to residues 6 to 284 of 284 from SwissProt.40 : >sp|P25478|VPO_BPP2 PRESUMED CAPSID SCAFFOLDING PROTEIN (GPO) DNA sequence : GTGAAAGCAAAGCGTTTTCGCATCGGGGTGGAAGGTGCCACCACCGACGGACGCGAAATCCAGCGTGAATGGCTGGAACA GATGGCAGCCAGCTACAACCCGGCGGTGTATACCGCGCTGATTAACCTTGAGCACATCAAGTCTTATCTGCCGGACAGCA CCTTTAACCGCTACGGCAAGGTGACGGCGCTGTTTGCTGAAGAAATCACGGAAGGTCCGCTGGCAGGCAAGATGGCGCTG TATGCCGACGTTGAGCCAACGGAGTCCCTGGTGGAACTGGTGAAAAAAGGCCAGAAATTATTCACCTCTATGGAAGTCAG CCCGAAGTTTGCTGATACGGGCAAAGCCTACCTGGTCGGGCTGGCTGCCACTGATGATCCTGCCAGTCTGGGTACGGAAA TGCTGACATTCAGCGCCAGTGCAGCCCATAACCCGCTGGCAAACCGCAAGCAGAATCCCGCCAATCTCTTTACCGCCGCA GAGGAAACGGTGATCGAACTGGAAGAAATCCAGGAGGACAAGCCGTCCCTGTTTGCCCGCGTCACGGCGCTGTTCACCAA AAAAGAGCAGTCCGACGATGCCCGGTTCTCTGATGTGCATAATGCCGTGGAGCTGGTCGCCACTGAGCAGCAGAACCTGA GCGCACGCACCGAAAAATCCCTGTCTGAGCAGGAAGAACGCCTGTCTGAGCTGGAGACAGCCCTGCAGGCACAGCAAACC GCCTTTAACGAACTGGTGGACAAGCTGAGTCATGAAGACAGCCGCCAGGACTACCGCCAGCGTGCAACAGGCGGTAACGC CCCCGTTGACACTCTGACCAATTGCTGA Protein sequence : MKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALINLEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKMAL YADVEPTESLVELVKKGQKLFTSMEVSPKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFTAA EETVIELEEIQEDKPSLFARVTALFTKKEQSDDARFSDVHNAVELVATEQQNLSARTEKSLSEQEERLSELETALQAQQT AFNELVDKLSHEDSRQDYRQRATGGNAPVDTLTNC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4626 | NP_458708.1 | putative capsid protein | Not tested | SPI-7 | Protein | 6e-98 | 84 |
| t4320 | NP_807915.1 | capsid protein | Not tested | SPI-7 | Protein | 6e-98 | 84 |
| unnamed | ABR13465.1 | putative capsid scaffold | Not tested | PAGI-6 | Protein | 3e-43 | 46 |
