Gene Information

Name : ybbA (c0616)
Accession : NP_752549.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 595694 - 596380 bp
Length : 687 bp
Strand : +
Note : Escherichia coli K-12 ortholog: b0495; Escherichia coli O157:H7 ortholog: z0648

DNA sequence : 
ATGCCAGCGGAAAACATTGTTGAAGTTCATCATCTTAAGAAGTCCGTCGGTCAGGGGGAGCATGAACTCTCCATCCTCAC
CGGAGTTGAGCTGGTTGTCAAACGTGGCGAGACCATCGCACTGGTGGGTGAGTCGGGATCGGGTAAGTCAACCTTGCTGG
CGATCCTCGCCGGGCTGGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAA
GCGCGGGCAAAGTTGCGCGCGAAGCACGTAGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACCCTTAACGCGCTGGA
AAACGTCGAGCTTCCGGCGCTGCTGCGCGGTGAGAGTAGCGCAGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGT
TAGGGTTGGGTAAACGTCTTGATCATCTTCCGGCACAGCTTTCTGGCGGCGAACAGCAACGAGTGGCGCTGGCGCGAGCC
TTTAATGGTCGATCTGATGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACCGCCAGACGGGCGATAAAATTGCCGA
TCTGCTTTTTTCCCTCAACCGTGAGCATGGCACCACGTTGATTATGGTGACCCATGACCTGCAACTGGCGGCACGCTGTG
ACCGCTGCTTACGGCTGGTGAACGGGCAGTTGCAGGAGGAAGCATGA

Protein sequence : 
MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEE
ARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRSDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLRLVNGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA NP_752549.1 ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 2e-33 45
ybbA NP_752549.1 ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 2e-39 43
ybbA NP_752549.1 ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 3e-36 41