Gene Information

Name : c5208 (c5208)
Accession : NP_757056.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 4962284 - 4962847 bp
Length : 564 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b0601; Escherichia coli O157:H7 ortholog: z1644

DNA sequence :
ATGGGGGATTCTGTGACACCTGAAGTGGAGGTACTGAGTGACATGATTCGTCAGTACTTCAGCCAGGAACGATCAGAAAA
AGAGACTATACAGGCTCTGAATCATCTGCGCAGGGTACTTCATGAAGTCAGCCCTTTTGCACAGGAGCCTGTGGACTGTG
TGCTGTGGGTGAAAGCAGATGAGGTGGTGGCCAACGATTATAACCCCAATGTCATGGCGCCGGGTGAGAAGAAACTGCTG
AAGCAGTCACTGGAGAAAGATGGTTTCACCCAACCCGTGGTGGTGTCGGCGGAGAAGAACCCCTATCTGGTGGTGGATGG
TTTTCATCGTCAGTTACTGGGCAGGGAAGCAGGTACAGGAAAACGCCTGAAAGGCTGGTTGCCAGTGGCCTGTATTAATC
CGGAAAGAAAGGGACAGGCCACACGTATGGCGGCCACCATACGGCATAACCGGGCCAGGGGTAAACACCAGATAACCTCA
ATGTCTGATATTGTCAGGGACCTGTCACGCCTGGGCTGGACGGATGAACGCATTGGTACAGAGCCTGGGGATGGACCAGG
ATGA

Protein sequence :
MGDSVTPEVEVLSDMIRQYFSQERSEKETIQALNHLRRVLHEVSPFAQEPVDCVLWVKADEVVANDYNPNVMAPGEKKLL
KQSLEKDGFTQPVVVSAEKNPYLVVDGFHRQLLGREAGTGKRLKGWLPVACINPERKGQATRMAATIRHNRARGKHQITS
MSDIVRDLSRLGWTDERIGTEPGDGPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-86 100
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-86 100
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-86 100
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 4e-78 93
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 4e-78 93
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 4e-77 91
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 4e-77 91
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 1e-77 91
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 1e-62 77
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 3e-63 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5208 NP_757056.1 hypothetical protein VFG1505 Protein 5e-78 91