Gene Information

Name : c5172 (c5172)
Accession : NP_757020.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4934476 - 4935216 bp
Length : 741 bp
Strand : +
Note : Residues 1 to 246 of 246 are 100.00 pct identical to residues 1 to 246 of 246 from GenPept.129 : >gb|AAL67401.1|AF447814_69 (AF447814) intergenic-region protein [Escherichia coli]

DNA sequence : 
ATGAATCAACCAATACACAATGCTTACTGGTTATCCCGTTTTGACATCCTTCTCGACAGTGCCCTGGCGCAGCACCGTGC
CGTCTCGTTAATCCGAGTGGATTTACGTTTCCCTGAGTATATGCCTGTCACCATCATGGATCCCGATCCGGATTCAGCGG
TGATTTCTCGTTTTTTTGCATCCCTGAAAGCCAAAATTCAGGCTTACCAGCGGAAAAAAAGATGTGCCAATCAGCGTGTG
CATGCAACCAGCCTGCGTTATTTCTGGTGCCGGGAGTTCGGCAAGATGTATGGCAGGAAACATTATCACGTGATATTACT
GCTCAACAAAGATACCTGGTGCTCGATCGGGGATTTCAGCGAACCGTCTTCGCTGGCGACGATGATCCAGGAGGCATGGT
GCAGCGCCCTGCATCTTGAGCCCTGGCAAGGCGATGGCCTGGTCCATTTTTCCAGGTGGACGCCTTCCCGTAAACCAGCA
TCGTCTGATGCTCGCCCTTCTTCCGATGACACGCCTTTGTCGGGTGGATGTTCTGATACCTGGAAGGCTTCAGACAAAAA
GCCGGGTGAAGCCGCTGTTCTCTGGATCAAGCGTGGTGATGTGGGAGCGCTGCAGAAAGCCCGGAACAGAGCCAGTTATC
TCGTAAAATATGAAACGAAGTTGCATAACGGTTCCGGGCAACGTAATTATGGTTGCAGTCGTGGGCCGGGACGTCTACTG
GATGGCAGGAGAAGCCTGTAA

Protein sequence : 
MNQPIHNAYWLSRFDILLDSALAQHRAVSLIRVDLRFPEYMPVTIMDPDPDSAVISRFFASLKAKIQAYQRKKRCANQRV
HATSLRYFWCREFGKMYGRKHYHVILLLNKDTWCSIGDFSEPSSLATMIQEAWCSALHLEPWQGDGLVHFSRWTPSRKPA
SSDARPSSDDTPLSGGCSDTWKASDKKPGEAAVLWIKRGDVGALQKARNRASYLVKYETKLHNGSGQRNYGCSRGPGRLL
DGRRSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3496 YP_854315.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-106 100
c5172 NP_757020.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-106 100
unnamed AAL67401.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-106 100
ORF_40 AAZ04449.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-106 100
unnamed CAD42091.1 hypothetical protein Not tested PAI II 536 Protein 3e-90 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5172 NP_757020.1 hypothetical protein VFG1610 Protein 2e-90 86