Gene Information

Name : c5167 (c5167)
Accession : NP_757015.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Unknown
Product : transposase IS629
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4932138 - 4932815 bp
Length : 678 bp
Strand : -
Note : Escherichia coli O157:H7 ortholog: z3297

DNA sequence :
ATGATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAAC
GTATTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAG
AGATACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTGCGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATC
AGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTAC
GACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGG
TGGCTGATTTTACTTACGTCAGCACATGGCGGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATC
GTGGGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACC
GTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGAT
TACTGGCATCAACAGGAAGTAACAGGCGACTCGTATGA

Protein sequence :
MMPLLDKLREQYGVGPLCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVRKVWRQLLREGI
RVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYI
VGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSNRRLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-104 100
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 3e-102 99
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-100 99
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-101 98
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-100 97
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 4e-100 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-97 96
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-97 96
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-97 96
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-97 96
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-97 95
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 7e-99 95
Z1198 NP_286733.1 transposase Not tested TAI Protein 4e-97 95
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 5e-99 95
Z1638 NP_287141.1 transposase Not tested TAI Protein 4e-97 95
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 2e-97 95
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 5e-96 95
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-96 94
CDCE8392_1774 YP_005134308.1 transposase-like protein Not tested Not named Protein 4e-30 48
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5167 NP_757015.1 transposase IS629 VFG1602 Protein 7e-97 94