Gene Information

Name : c5160 (c5160)
Accession : NP_757008.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : transcriptional regulator YfjR
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 4927861 - 4928541 bp
Length : 681 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b2634

DNA sequence : 
ATGTCTGATAATCGTTCCCGGCATGATCGCCTGGCGGTTCGCTTATCACTCATTATCAGCCGACTGATGACCGGAGAATC
TCTGTCACTAAAAACACTGTCAGATGAATTTGGCGTTACAGAACGTACTTTACAGCGCGATTTTCATCAGCGTCTGGTTC
ACCTGGATTTAGAGTACAGAAATGGCAGGTACAGCCTCAGACGACAGAGCAGCCCGGGTGCGATCCCTGAAATGCTTTCT
TTTATACAGAATACCGGGATCGCACGGATACTTCCGCTCCGGAACGGACGACTGATAACCTGTCTTACCGACAACCAGGA
GCCCTCTCCCTGCCTTATCTGGCTACCGGCGCCGGATATCACTGCAACGTTCCCCAAGTGTTTCTCGCAACTCATCCTGG
CAATAAGACAGTGTATCCACATCTCTCTGATGGCTGAGCGATGGTATCCGTCACTGGAGCCCTGCCGGCTCATTTATTAC
AGCGGTAGCTGGTATCTGATCGCGTTACAGAAGGGAAAACTGCAGGTCTTTCCTCTGGCAGATATCAAATCAGTCAGCCT
GACATCAGAACGGTTTGAACGGAGAGGCCACATCCACAGTCTGGTCGCTGAAGAGCGTTTTATCTCCGCCCTGCCACATT
TCTCTTTCATCCATAAACTTATCAACACCTTTAACCTGTGA

Protein sequence : 
MSDNRSRHDRLAVRLSLIISRLMTGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYRNGRYSLRRQSSPGAIPEMLS
FIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDITATFPKCFSQLILAIRQCIHISLMAERWYPSLEPCRLIYY
SGSWYLIALQKGKLQVFPLADIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 2e-104 100
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 3e-103 99
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 7e-104 99
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 7e-104 99
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-103 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5160 NP_757008.1 transcriptional regulator YfjR VFG1613 Protein 4e-104 99
c5160 NP_757008.1 transcriptional regulator YfjR VFG1523 Protein 2e-103 99