Gene Information

Name : c5156 (c5156)
Accession : NP_757004.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4925889 - 4926707 bp
Length : 819 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b0252; Escherichia coli O157:H7 ortholog: z1655

DNA sequence :
ATGCAATTAGCCAGTCGTTTTGGTCATGTAAATCAGATACGCCGTGATCGTCCCTTAACTCGTGAAGAACTGATGCAGGT
CGTCCCCAGCGTATTCGGGGAAGATAAGCACACATCCAGAAGCGAGAACTATACCTGGATCCCCACCATCACAGTGCTGG
AAAGCCTGCAGCGGGAAGGTTTTCAGCCATTCTTCGCCTGCCAGACCCGTGTGCGCGACCCGGGCCGCCGGGGATACACC
AAACACATGCTGCGTCTGCGCCGTGACGGGGAGATAAACGGACAACATGTCCCTGAAATCATCCTGCTGAACTCCCATGA
CGGTACCTCCAGCTACCAGATGCTGCCGGGTTACTTCAGGTTCGTCTGCCAGAACGGATGCGTCTGTGGTCAGTCTCTGG
GGGAAGTGCGTGTTCCACACCGGGGAAATGTAGTGGAGAAAGTTATCGAAGGGGCTTACGAGGTGGTGGGGGTTTTTGAC
CGGATTGAAGAAAAGCGTGACGCCATGCAGTCGCTGGTCCTGCCGCCACTGGCACGCCAGGCGCTGGCACAGGCGGCACT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGACATTCTGACGCCGCGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGCGCATATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGCGCTAAAGGAAAA
CGTATCCACACCCGTGCCATTCACAGCATCGACACGGACATTAAGCTCAATCGCGCATTGTGGGTAATGACAGAAACGCT
GCTGGAGAACATGCGCTGA

Protein sequence :
MQLASRFGHVNQIRRDRPLTREELMQVVPSVFGEDKHTSRSENYTWIPTITVLESLQREGFQPFFACQTRVRDPGRRGYT
KHMLRLRRDGEINGQHVPEIILLNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPLARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRAIHSIDTDIKLNRALWVMTETLLENMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-119 100
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-119 99
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-119 99
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 5e-114 94
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 1e-113 94
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 1e-113 94
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 1e-113 94
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 5e-114 94
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 4e-112 92
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 4e-112 92
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-109 91
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-107 89
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 6e-108 89
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-107 89
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 3e-108 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-71 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 5e-70 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5156 NP_757004.1 hypothetical protein VFG0658 Protein 2e-114 94
c5156 NP_757004.1 hypothetical protein VFG1676 Protein 2e-112 92
c5156 NP_757004.1 hypothetical protein VFG1526 Protein 1e-109 91
c5156 NP_757004.1 hypothetical protein VFG1615 Protein 3e-108 89