Gene Information

Name : c5150 (c5150)
Accession : NP_756998.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4924085 - 4924513 bp
Length : 429 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b2004; Escherichia coli O157:H7 ortholog: z3164

DNA sequence :
ATGAGCCGAATTATCGCCACCATCGAACCATTCTTAACTGATTTCTGTGAGGACTTTATCGTGTCAGACACACTGCCCGG
GACAACGCATCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC
TGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGTGCCGGTATCAGAGGCCGGTTCAGCGACGCGGATGCATAC
CATCTGGGCCAGGCCTTTCCGCTGCTGATGAAACAACTGGAACTCATGCTCACCAGCGGTGAACTGAATCCCCGCCATCA
GCATACCGTCACGCTGTATGCAAAAGGGCTGACCTGCGAAGCCGATACCCTCGGCAGCTGTGGTTGCGTTTATCTGGCTG
TTTATCCGACACCCGAAACGAAAAAGTAA

Protein sequence :
MSRIIATIEPFLTDFCEDFIVSDTLPGTTHPDDNHDRPWWGLPCTVTPCFGARLVQEGNRLHYLADRAGIRGRFSDADAY
HLGQAFPLLMKQLELMLTSGELNPRHQHTVTLYAKGLTCEADTLGSCGCVYLAVYPTPETKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-64 100
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-62 97
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-62 97
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 9e-52 96
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-51 95
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 1e-60 95
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 3e-51 94
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 2e-50 94
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 2e-50 94
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 3e-50 93
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 1e-49 93
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 4e-49 92
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 3e-52 92
Z1220 NP_286755.1 structural protein Not tested TAI Protein 3e-48 91
Z1658 NP_287161.1 structural protein Not tested TAI Protein 3e-48 91
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-51 91
unnamed AAL57576.1 unknown Not tested LEE Protein 5e-52 90
unnamed AAL08477.1 unknown Not tested SRL Protein 4e-48 89
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 1e-46 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5150 NP_756998.1 hypothetical protein VFG1619 Protein 4e-52 96
c5150 NP_756998.1 hypothetical protein VFG0662 Protein 4e-51 94
c5150 NP_756998.1 hypothetical protein VFG1681 Protein 2e-49 92
c5150 NP_756998.1 hypothetical protein VFG1068 Protein 2e-48 89