Gene Information

Name : c5148 (c5148)
Accession : NP_756996.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4923133 - 4923621 bp
Length : 489 bp
Strand : -
Note : Escherichia coli O157:H7 ortholog: z5092

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTGAATCTCGCTGAACTGATTAACCATGTCGCTGAAAACGGTTATTCACTCCGCGTGGTGGAGGAATCCGACCAAC
AGTCAACCTGCACACCACCACCGTTTACGGCCCTTGCCGGCATACGCTGCAGTACCGCACATATCACGGAAAAGGACAAC
GCCTGGCTGTACTCGCTGTCACATCAGACGAATGACTTCGGCGAATCAGAATGGATTCATTTTACAGGTAGCGGATATCT
GTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTTAAACGCCTGGGACTGTCAAAAACGTTCCGCCGTCTGGTTG
TCACACTTATCCGGCGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGTCTGCCTGACCTGCCCACTTTC
GACTGGTAA

Protein sequence :
MKLALTLEADSINVQALNMGRIVVDVDGVNLAELINHVAENGYSLRVVEESDQQSTCTPPPFTALAGIRCSTAHITEKDN
AWLYSLSHQTNDFGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIRRYGVSLIHLDASAECLPDLPTF
DW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-71 100
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 2e-68 93
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 2e-60 93
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 5e-68 92
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 1e-68 92
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 1e-64 91
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 1e-65 91
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 5e-67 89
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 2e-64 89
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 2e-64 89
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 6e-65 89
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 6e-65 89
unnamed AAC31487.1 L0008 Not tested LEE Protein 2e-64 89
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 2e-64 89
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 1e-61 88
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-63 88
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-62 88
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 8e-64 88
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 8e-64 88
unnamed AAL08479.1 unknown Not tested SRL Protein 5e-64 88
unnamed AAL57574.1 unknown Not tested LEE Protein 7e-55 87
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 7e-57 87
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 6e-61 86
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 2e-60 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5148 NP_756996.1 hypothetical protein VFG1621 Protein 6e-65 91
c5148 NP_756996.1 hypothetical protein VFG0787 Protein 7e-65 89
c5148 NP_756996.1 hypothetical protein VFG0664 Protein 2e-64 88
c5148 NP_756996.1 hypothetical protein VFG1070 Protein 2e-64 88
c5148 NP_756996.1 hypothetical protein VFG1683 Protein 2e-61 86
c5148 NP_756996.1 hypothetical protein VFG1531 Protein 1e-60 85