Gene Information

Name : c5146 (c5146)
Accession : NP_756994.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4922315 - 4922839 bp
Length : 525 bp
Strand : -
Note : Escherichia coli O157:H7 ortholog: z1664

DNA sequence :
ATGTCTGATATCACAGCCTCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGTATCTGCCGCAT
TCTGGCTGTACGAAAAAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGACATCTCAGTTCTGACGGAAA
GCATTGGAGGTAAAACCGCCCGGGACTGGGCCATGAAACAGGATTTTCGCTGTGGCTGCTGGCTGATGGATAAACCTGAA
ACAGCAATGAAAGCCATCACCCGCAATCTCGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT
AATGGATGCGCAGGCCCGTGATACATGGTACCGGTCACTGGAATACGATAATTTTCCGGAAATCAGTGAAGCGAACATTC
TGAGCACATTTGAACAACTGCACCAGAATAAGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGACTGAAC
TGGAATTACAAAACCAATTGCCCCTGCAAATTTGGCAGTTATTAG

Protein sequence :
MSDITASRPEVVNGHTDVICSTSICRILAVRKSTLLQIDTLIRQLADISVLTESIGGKTARDWAMKQDFRCGCWLMDKPE
TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLN
WNYKTNCPCKFGSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67385.1 L0010-like protein Not tested PAI II CFT073 Protein 6e-78 100
c5146 NP_756994.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-78 100
unnamed AAL08481.1 unknown Not tested SRL Protein 2e-74 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c5146 NP_756994.1 hypothetical protein VFG1072 Protein 8e-75 96