Gene Information

Name : yjdB (c5119)
Accession : NP_756969.2
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Resistance
Product : cell division protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 4892483 - 4894156 bp
Length : 1674 bp
Strand : -
Note : with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division

DNA sequence :
ATGCGCACTTTGTTCGATGGAAACACCGTGATGTTGAAGCGCCTACTAAAAAGACCCTCTTTAAATTTATTCTCCTGGTT
ATTACTTGCTACTTTTTATATCTCAGTCTGCCTGAATATCGCCTTTTTTAAACAGGTGCTACAGGTGTTACCGCTGGATT
CACTGCATAACGTGCTGGTTTTCTTGTCGATGCCGGTCGTCGCATTCAGCGTGATTAATATTGTCCTGACACTAGGCTCT
TTCTTATGGCTTAATCGTCCACTCGCCTGCCTGTTTATTCTGGTCGGTGCGGCTGCACAATATTTCATCATGACCTATGG
CATCGTCATCGACCGTTCAATGATCACCAATATCATTGATACTACGCCGGCGGAAAGTTATGCGTTGATGACGCCACGAA
TGTTATTAACGCTGGGGTTAAGTGGCGTGTTGGCCGCGATTATTGCCTGCTGGATCAAAATCAAACCCACCACCTCACGC
CTGCGCAGCGTTCTTTTCCGCGGGGCCAACATCCTGATTTCTGTGCTGCTGATTCTGCTGGTTGCCGCACTGTTCTACAA
AGACTATGCCTCGCTGTTTCGCAACAACAAAGAGCTGGTGAAATCCTTAAGCCCGTCCAACAGCATTGTTGCTAGCTGGT
CGTGGTACTCTCACCAGCGGTCAGCCAACCTGCCACTGATACGCATTGGTGAAGATGCTCACCGCAACCCATTAATGCAA
AATGGGAAACGTAAAAACCTGACCATTTTGATCGTCGGCGAAACCTCGCGGGCGGAGAACTTCTCCCTCAACGGTTACCA
GCGTGAAACTAACCCGCGGCTGGCAAAAGATAACGTGGTCTATTTCCCTAATACCGCCTCTTGCGGCACAGCAACAGCCG
TCTCAGTGCCGTGCATGTTCTCGGATATGCCGCGTGAGCACTACAAAGAAGAGCTGGCACAGCACCAGGAAGGCGTGCTG
GATATCATTCAGCGAGCGGGCATCAACGTGCTGTGGAATGACAACGATGGCGGCTGTAAAGGCGTTTGCGATCGCGTACC
TCACCAGAACATCACCGCGCTGAACCTGCCTGGTCAGTGCATCAACGGCGAATGCTATGACGAAGTGCTGTTCCACGGGC
TGGAAGAGTACATCAATAATCTGCAAAGCGATGGCCTCATTGTATTACACACTATCGGCAGCCACGGCCCGACCTATTAC
AACCGCTATCCGCCGCAGTTCAGGAAATTTACCCCAACCTGCGACACTAACGAGATCCAGACCTGTACCAAAGAGCAACT
GGTGAACACTTACGACAACACGCTGGTTTACGTCGACTATATTGTTGATAAAGCGATTAATCTGCTGAAAGAACATCAGG
ATAAATTTACCACCAGCCTGGTTTATCTTTCTGACCACGGTGAATCGTTAGGTGAAAATGGCATCTATCTGCACGGTCTG
CCTTATGCCATCGCCCCGGATAGCCAAAAACAGGTGCCGATGCTGCTGTGGCTATCGGAGGATTATCAAAAACGGTATCA
GGTTGACCAGAACTGCCTGCAAAAACAGGCGCAAACGCAACACTATTCACAAGACAATTTATTCTCAACCTTATTGGGCC
TGACTGGCGTTGAGACGAAGTATTACCAGGCTGCGGATGATATTCTGCAAACTTGCAGGAGAGTGAGTGAATGA

Protein sequence :
MRTLFDGNTVMLKRLLKRPSLNLFSWLLLATFYISVCLNIAFFKQVLQVLPLDSLHNVLVFLSMPVVAFSVINIVLTLGS
FLWLNRPLACLFILVGAAAQYFIMTYGIVIDRSMITNIIDTTPAESYALMTPRMLLTLGLSGVLAAIIACWIKIKPTTSR
LRSVLFRGANILISVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRSANLPLIRIGEDAHRNPLMQ
NGKRKNLTILIVGETSRAENFSLNGYQRETNPRLAKDNVVYFPNTASCGTATAVSVPCMFSDMPREHYKEELAQHQEGVL
DIIQRAGINVLWNDNDGGCKGVCDRVPHQNITALNLPGQCINGECYDEVLFHGLEEYINNLQSDGLIVLHTIGSHGPTYY
NRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGENGIYLHGL
PYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 4e-92 41
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 4e-92 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yjdB NP_756969.2 cell division protein BAC0485 Protein 2e-154 59