Gene Information

Name : c4571 (c4571)
Accession : NP_756431.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4338265 - 4338750 bp
Length : 486 bp
Strand : +
Note : Escherichia coli K-12 ortholog: b2643; Escherichia coli O157:H7 ortholog: z1656

DNA sequence :
ATGACAACCTTTTCGCATAGCTCCACCACACCTTCTGTTTCCGTAACTACTGCATCAGGGAATAACCAGTCTCAACTGGT
TGCCACTCCCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCACTTTGGCCTCATTCCACAGTGGGTGACCCTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTGTGAAGACTACTGCGGGGGTATCTGGAATCTGTACACCCTGAACAAC
GGTGGCGCATTTATAGCACCTGAACCGGATGAAGATGATGGAGAAACCTGGATACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCCGCCGGCATTGCAGCCTGTCTGATGACGTACAGCCATCATGCCTGTCGTACGGAGTGTT
ATGCCATGACGGTCCATTATTATCGGTTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATT
GACTGA

Protein sequence :
MTTFSHSSTTPSVSVTTASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN
GGAFIAPEPDEDDGETWILFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 7e-65 100
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 6e-64 99
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 9e-64 97
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 6e-63 96
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-58 96
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 6e-59 96
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 8e-64 96
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 6e-59 96
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-56 96
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 3e-57 95
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 7e-62 95
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 1e-56 95
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 1e-56 93
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 1e-56 93
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-57 93
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-57 93
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-57 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c4571 NP_756431.1 hypothetical protein VFG1527 Protein 3e-65 100
c4571 NP_756431.1 hypothetical protein VFG1616 Protein 2e-64 99
c4571 NP_756431.1 hypothetical protein VFG1677 Protein 4e-64 97
c4571 NP_756431.1 hypothetical protein VFG0659 Protein 4e-57 93