Gene Information

Name : c4566 (c4566)
Accession : NP_756426.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : transcriptional regulator YfjR
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 4335521 - 4336201 bp
Length : 681 bp
Strand : +
Note : Escherichia coli K-12 ortholog: b2634

DNA sequence : 
ATGTCTGATGATCGTTCCCGGCATGATCGTCTGGCGGTTCGCTTATCACTCATTATCAGCCGACTGATGGCCGGAGAATC
TCTGTCACTAAAGACACTGTCAGATGAATTTGGCGTTACAGAACGTACTTTACAGCGCGATTTTCATCAGCGTCTGGTTC
ACCTGGATTTAGAGTACAGAAATGGCAGGTACAGCCTCAGACGACAGAGCAGCCCGTGTGCGATCCCTGAAATGCTTTCT
TTTATACAGAATACCGGGATCGCACGGATACTTCCGCTCCGGAACGGACGACTGATAACCTGTCTTACCGACAACCAGGA
GCCCTCTCCCTGCCTTATCTGGCTACCGGCGCCGGATATCACTGCAACGTTCCCCGAGTGTTTCTCGCAACTCATCCTGG
CAATAAGACAGTGTATCCACATCTCTCTGATGACTGAGCGATGGTATCCGTCACTGGAGCCCTGCCGGCTCATTTATTAC
AGCGGTAGCTGGTATCTGATCGCGTTACAGAAGGGAAAACTGCAGGTCTTTCCTCTGGCAGATATCAAATCAGTCAGCCT
GACATCAGAACGGTTTGAACGGAGAGGCCACATCCACAGTCTGGTCGCTGAAGAGCGTTTTATCTCCGCCCTGCCACATT
TCTCTTTCATCCATAAACTTATCAACACCTTTAACCTGTGA

Protein sequence : 
MSDDRSRHDRLAVRLSLIISRLMAGESLSLKTLSDEFGVTERTLQRDFHQRLVHLDLEYRNGRYSLRRQSSPCAIPEMLS
FIQNTGIARILPLRNGRLITCLTDNQEPSPCLIWLPAPDITATFPECFSQLILAIRQCIHISLMTERWYPSLEPCRLIYY
SGSWYLIALQKGKLQVFPLADIKSVSLTSERFERRGHIHSLVAEERFISALPHFSFIHKLINTFNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 1e-102 99
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 3e-103 99
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 7e-103 98
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 2e-102 98
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-102 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c4566 NP_756426.1 transcriptional regulator YfjR VFG1613 Protein 2e-103 99
c4566 NP_756426.1 transcriptional regulator YfjR VFG1523 Protein 7e-103 99