Gene Information

Name : c4564 (c4564)
Accession : NP_756424.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 4334434 - 4335318 bp
Length : 885 bp
Strand : +
Note : Residues 1 to 294 of 294 are 94.55 pct identical to residues 1 to 294 of 294 from GenPept.129 : >gb|AAL67395.1|AF447814_63 (AF447814) unknown [Escherichia coli]

DNA sequence : 
ATGTCATTCAGCCATTCTTCCCTCTCCGCACAAGTGAAATCATATCTGACGTTTCTTCCTGAAGAAATTCGTCAGAAAAT
TCTTGAACATCTCCACAGCGTTATTCATTACGAACCCGTGATTGGCATTATGGGTAAATCCGGCACCGGCAAAAGTAGCC
TGTGTAATGCTATTTTTCAGTCCCATATCTGTGCCACGCATCCCCTGAACGGCTGCACCCGCCAGGCTCATCGTCTTACC
CTGCAGATCGGTGAACGCAGAATGACGCTGGTCGATCTGCCCGGCATTGGAGAGACACCGCAGCATGATCAGGAATACCG
GGAGCTTTACCGTCAGTTACTGCCGGAACTGGATCTGATTATCTGGATCCTGCGGGCTGATGAACGTGCGTATGCTGCCG
ATATTGCCATGCATCAGTTTTTACTGAATGAAGGTGCAGATCCCTCGCGTTTTCTGTTTGTTCTCAGCCATGCCGATCGC
GTGTTTCCTGCTGAAGAATGGAATGCCACAGAAAAATGCCCATCCCGTCACCAGGAACTCTCACTGGCAACTGTTACAGC
CAGGGTGGCAACCCTGTTCCCGTCATCATTTCCGGTACTCCCCGTTGCTGCGCCTGTCGGCTGGAATCTTCCGGCGTTTG
TGTCGCTGATGATCCACGCCCTGCCACCGCAGGCAACCAGTGCGGTTTATTCACATATCCGGGGGGAAAACCGCTCTGAA
CAGGCCCAGAAACACGCACAACAGACTTTTGGTGACGCCATCGGGAAAAGTTTTGACGACGCCGTTGCCCGGTTCACTTT
TCCGGTCTGGATGTTACAGCTTCTGCGTAAAGCCCGGGACCGCATTATCCGCCTGCTGGAAACACTGTGGGATCGTCTGT
TCTGA

Protein sequence : 
MSFSHSSLSAQVKSYLTFLPEEIRQKILEHLHSVIHYEPVIGIMGKSGTGKSSLCNAIFQSHICATHPLNGCTRQAHRLT
LQIGERRMTLVDLPGIGETPQHDQEYRELYRQLLPELDLIIWILRADERAYAADIAMHQFLLNEGADPSRFLFVLSHADR
VFPAEEWNATEKCPSRHQELSLATVTARVATLFPSSFPVLPVAAPVGWNLPAFVSLMIHALPPQATSAVYSHIRGENRSE
QAQKHAQQTFGDAIGKSFDDAVARFTFPVWMLQLLRKARDRIIRLLETLWDRLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33781.1 hypothetical protein Not tested PAI I 536 Protein 2e-134 96
APECO1_3493 YP_854318.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-134 95
c5162 NP_757010.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-134 95
unnamed CAD42093.1 hypothetical protein Not tested PAI II 536 Protein 2e-132 95
unnamed AAL67395.1 unknown Not tested PAI II CFT073 Protein 7e-134 95
ORF_43 AAZ04452.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-134 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c4564 NP_756424.1 hypothetical protein VFG1522 Protein 9e-135 96
c4564 NP_756424.1 hypothetical protein VFG1612 Protein 1e-132 95