Gene Information

Name : c4552 (c4552)
Accession : NP_756412.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Unknown
Product : transposase insC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 4329034 - 4329369 bp
Length : 336 bp
Strand : +
Note : Escherichia coli K-12 ortholog: b4272

DNA sequence :
GTGATAGTCTTAATACTAGTTTTTAGACCAGTCATTGGAGAACAGATGATTGATGTCTTAGGACCGGAGAAACGCAGACG
GCGTACTACACAGGAAAAGATCGCTATTGTTCAGCAGAGCTTTGAACCGGGAATGACGGTCTCCCTTGTTGCCCGGCAAC
ACGGTGTGGCAGCCAGCCAGTTATTTCTCTGGCGCAAGCAATACCAGGAGGGAAGTCTTACTGCTGTGGCCGCAGGAGAA
CAGGTCGTTCCTGCCTCTGAACTTGCTGCTGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTGAACAAAACGCCGGA
TGTCTCCCGGCTCTGA

Protein sequence :
MIVLILVFRPVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGE
QVVPASELAAAMKQIKELQRLLNKTPDVSRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 6e-43 97
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 1e-36 97
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 4e-43 97
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 2e-36 97
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 2e-36 97
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 2e-36 97
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 2e-36 97
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 2e-36 97
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-36 97
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-36 97
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 3e-42 96
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 3e-42 96
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 3e-42 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c4552 NP_756412.1 transposase insC VFG1733 Protein 2e-43 97
c4552 NP_756412.1 transposase insC VFG0609 Protein 8e-43 96
c4552 NP_756412.1 transposase insC VFG0648 Protein 9e-43 96
c4552 NP_756412.1 transposase insC VFG0622 Protein 8e-43 96