Gene Information

Name : sgbU (c4405)
Accession : NP_756267.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Unknown
Product : L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : 5.-.-.-
Position : 4187675 - 4188568 bp
Length : 894 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
ATGCGCAAATCGACTCCATCTGGGGAGGCAAGCGTGCGTAATCATCCGTTAGGCATTTATGAAAAAGCGCTGGCGAAAGA
TCTCTCCTGGCCGGAGCGGCTGGTGCTGGCAAAAAGCTGTGGTTTTGATTTTGTCGAAATGTCGGTGGATGAAACCGACG
AACGGTTGTCACGTCTTGACTGGAGCGCCGCACAACGTACTTCGCTGGTTACCGCGATGATCGAAACGGGTGTTGCTATT
CCGTCAATGTGCCTGTCCGCACATCGTCGTTTTCCTTTTGGTAGCCGGGACGACGCCGTGCGCCAGCGGGCGCGGGAGAT
TATGAGTAAAGCGATTCGCCTGGCGCGCGATCTCGGCATTCGTACTATTCAACTGGCAGGTTACGACGTCTATTACGAAG
ACCACGACGAAGGCACCCAGCAACGTTTTGCTGAAGGGCTGGCGTGGGCGGTCGAACAGGCGGCGGCATCACAAGTCATG
CTGGCAGTGGAGATTATGGATACTGCGTTTATGAACTCCATCAGCAAATGGAAAAAATGGGACGAGATGCTCGCCTCGCC
GTGGTTCACCGTCTACCCGGACGTCGGCAACCTCAGCGCCTGGGGCAATGATGTTCCCGCCGAACTGAAACTGGGCATCG
ACCGTATCGCCGCCATCCACCTGAAAGACACTCAACCCGTTACCGAACATAGCCCCGGACAGTTCCTCGATGTGCCGTTT
GGCGAAGGCTGTGTCGATTTTGTTGGCATCTTCAAAACGCTGCATGAGCTGAACTATCGCGGATCATTTCTGATTGAAAT
GTGGACCGAAAAAGCCAAAGAGCCGGTGCTGGAGATTATTCAGGCGCGGCGCTGGATTGAAGCGCGTATGCAGGAGGCCG
GATTTATATGTTAG

Protein sequence :
MRKSTPSGEASVRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLDWSAAQRTSLVTAMIETGVAI
PSMCLSAHRRFPFGSRDDAVRQRAREIMSKAIRLARDLGIRTIQLAGYDVYYEDHDEGTQQRFAEGLAWAVEQAAASQVM
LAVEIMDTAFMNSISKWKKWDEMLASPWFTVYPDVGNLSAWGNDVPAELKLGIDRIAAIHLKDTQPVTEHSPGQFLDVPF
GEGCVDFVGIFKTLHELNYRGSFLIEMWTEKAKEPVLEIIQARRWIEARMQEAGFIC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 3e-62 54