Gene Information

Name : c4213 (c4213)
Accession : NP_756077.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : chaperone protein fimC
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3998067 - 3998846 bp
Length : 780 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b4316; Escherichia coli O157:H7 ortholog: z2201

DNA sequence : 
ATGTTATTTCATCAACAAGGATGCTGTATGAAATGTATTATTGGAAATAAAAAATGGGTTTGTGGATTCAGGGATGAATT
AAAAGTATCACAAAATATTATACGCTCAGGGATTCTTTTTTTACTATCGATATTATTTATTAATAATGCGTCCGCGGGCG
GGTTTGGCCTTGGCGTAACGCGATTGATTTATCCGGCAGAAAGTAAGCAAATAACACTCAGTGTGCAAAATAGCGGTGAC
AACACCAGTTATTTAATTCAATCATGGGTTGATGACAGTAAAACGGAAAAAAAGAGCCAGGATTTTGTTATCACTCCTCC
CCTCTTTATGTTACCAACGCGTAAAGAAGCTTCATTACGTATCATGTTTCTTGGTAAGACTAATTTGCCGACCGATCGTG
AAACTTTGTATTGGATGAATGTTAAAGCAATTCCGCCAACAGATGAGAAAAATACACAGAAGAATACCTTACAGTTGGCA
TTACAAAACAAAATCAAGCTATTTTATCGCCCGGAAAATCTACCTGTGCAACCAGGAAAAGCACGAAATATGTTGCGGTT
TAAGTATGAGGGCAAACAACTAAAAGTTATCAATCCTTCGCCTTATTACCTGACACTGACAGGAATTAAAGTACAAGGGA
GTAAATTGCCCAATATGTTTGTACCACCGAAAAGTGATATTACGGTCTCGTCGCCAGTGACGTTGGCTGGTGAAATTACT
TATCAAACAATTAATGACTTTGGCGCTACGACGGAGCGGCAGAAAGGAATAATGCAGTAA

Protein sequence : 
MLFHQQGCCMKCIIGNKKWVCGFRDELKVSQNIIRSGILFLLSILFINNASAGGFGLGVTRLIYPAESKQITLSVQNSGD
NTSYLIQSWVDDSKTEKKSQDFVITPPLFMLPTRKEASLRIMFLGKTNLPTDRETLYWMNVKAIPPTDEKNTQKNTLQLA
LQNKIKLFYRPENLPVQPGKARNMLRFKYEGKQLKVINPSPYYLTLTGIKVQGSKLPNMFVPPKSDITVSSPVTLAGEIT
YQTINDFGATTERQKGIMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-46 47
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c4213 NP_756077.1 chaperone protein fimC VFG0911 Protein 1e-45 48
c4213 NP_756077.1 chaperone protein fimC VFG1644 Protein 2e-45 47
c4213 NP_756077.1 chaperone protein fimC VFG0875 Protein 6e-50 46
c4213 NP_756077.1 chaperone protein fimC VFG0445 Protein 3e-48 45
c4213 NP_756077.1 chaperone protein fimC VFG0455 Protein 3e-37 41