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Name : c3957 (c3957) Accession : NP_755823.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 3774738 - 3775745 bp Length : 1008 bp Strand : + Note : Escherichia coli K-12 ortholog: b3197; Escherichia coli O157:H7 ortholog: z4560 DNA sequence : TTGAATAACTGGAAACGCATTATGTCGCACGTAGAGTTACAACCGGGTTTTGACTTTCAGCAAGCAGGTAAAGAAGTCCT GGCGATTGAACGTGAATGCCTGGCGGAGCTTGATCAATACATCAATCAGAATTTCACGCTTGCCTGTGAAAAGATGTTCT GGTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGGAAATCGGGGCACATCGGGCGCAAAATGGCAGCAACATTTGCCAGC ACCGGTACACCTTCATTTTTCGTCCATCCTGGCGAAGCCGCGCATGGTGATTTAGGCATGGTCACCCCACAGGATGTGGT GATTGCTATCTCTAACTCAGGTGAATCCAGCGAAATCACGGCCTTAATTCCAGTGCTTAAGCGTCTTCACGTACCGTTAA TCTGCATCACCGGTTGCCCGGAGAGCAGCATGGCGCGCGCCGCAGATGTGCATCTGTGTGTTAAAGTAGCGAAAGAAGCC TGTCCGTTAGGGCTGGCACCGACCAGCAGCACAACCGCCACGCTGGTTATGGGCGATGCCCTCGCTGTCGCGCTGTTAAA AGCACGCGGCTTTACTGCTGAAGATTTTGCGCTCTCACACCCAGGCGGCGCACTGGGTCGTAAACTTCTGCTGCGCGTAA ACGATATTATGCATACGGGCGATGAGATCCCGCATGTTAAGAAAACGGCCAGTCTGCGTGACGCATTGCTGGAAGTTACC CGCAAAAATCTTGGTATGACTGTCATTTGCGATGACAATATGATGATTGAAGGCATCTTTACCGACGGTGATTTACGCCG TGTCTTCGATATGGGCGTGGATGTTCGTCGGTTAAGTATTGCCGATGTGATGACGCCGGGGGGAATACGCGTGCGCCCAG GCATTCTGGCCGTTGAGGCACTGAACTTAATGCAGTCCCGCCATATCACCTCCGTGATGGTTGCCGATGGCGACCATTTA CTCGGTGTGTTACATATGCATGATTTACTGCGTGCAGGCGTAGTGTAA Protein sequence : MNNWKRIMSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFAS TGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGCPESSMARAADVHLCVKVAKEA CPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVT RKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRRLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHL LGVLHMHDLLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-46 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-46 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 3e-46 | 45 |
