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Name : kpsC (c3690) Accession : NP_755565.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Virulence Product : KpsC protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3563 EC number : - Position : 3516742 - 3518769 bp Length : 2028 bp Strand : + Note : Residues 1 to 675 of 675 are 96.29 pct identical to residues 1 to 675 of 675 from SwissProt.40 : >sp|P42217|KSC5_ECOLI Capsule polysaccharide export protein KPSC DNA sequence : ATGATTGGCATTTACTCGCCTGGCATCTGGCGTATTCCGCATCTGGAGAAATTTCTGGCGCAACCATGCCAGAAACTTTC TCTGCTGCGCCCTGTTCCGCAAAACGTCGATGCTATCGCCGTGTGGGGACATCGTCCCAGCGCGGCGAAACCAGTCGCCA TCGCCAAAGCAGCGGGAAAACCCGTCATTCGTCTGGAAGATGGATTTGTGCGTTCGCTGGATCTTGGCGTCAATGGCGAG CCGCCGCTTTCTCTGGTGGTGGATGATTGTGGCATTTACTACGATGCCAGCAAGCCTTCGGCGCTGGAGAAACTGGTACA GGATAAAGCCGGAAATGCGGCATTGGCTGATCAGGCCAGAGAAGCGATGCACACCATCGTGACCGGGGATTTGTCGAAAT ATAACCTGGCGCCTGCATTTGTGGCTGATGAGTCAGAACGTGCAGACATCGTTCTGGTTGTCGATCAGACATTTAATGAC ATGTCCGTGACGTATGGCAATGCTGGCCCGCATGAGTTTGCTGCCATGCTGGAAGCTGCGATGGAGGAAAATCCTCAAGC CGAAATTTGGGTGAAGGTGCATCCGGATGTCCTGGAAGGAAAGAAAACAGGTTATTTCGCTGATCTGCGTGCCACGCAAC GAGTACGTTTGATTGCCGAGAATGTCAGCCCGCAGTCGCTATTGCGACACGTTTCCCGGGTTTACGTCGTGACATCCCAA TACGGCTTTGAAGCCTTGCTGGCAGGAAAACCAGTAACATGTTTCGGCCAGCCCTGGTATGCAGGCTGGGGCTTAACCGA CGATCGCCATCCGCAGTCCGCTTTGTTATCTGCCCGACGCGGTTCTGCCACGCTGGAAGAACTTTTTGCCGCTGCATACC TGCGTTACTGTCGCTATATCGACCCGCTCACGGGGGCCGCAAGCGATCTGTTTACCGTACTGCAATGGCTGCAATTACAG CGCAACCATCAGCAACAGCGTAATGGCTATTTATGGGCGCCAGGCTTAACGCTGTGGAAGTCGGCAATCCTGAAACCTTT CTTGTGTACCGCAACAAACAGACTGAGTTATTCACGCCGTTGTACTGCGGCGACGGCTTGCGTGGTATGGGGTGTAAAGG GAGAACAGCAATGGCTAGCCGAAGCGCAACAAAAATCACTGCCGTTATGGCGAATGGAAGATGGTTTTCTGCGTTCATCC GGACTTGGCTCTGACCTTTTGCCGCCGCTATCGTTGGTACTGGATAAACGCGGGATCTACTATGACGCCACGCGCCCCAG CGACCTGGAAGTCCTGCTTAATCACAGCCAGTTAACGCTGGCGCAGCAGATGCGAGCTGAAAAATTACGCCAGCGACTGG TTGAAAGCAAACTGAGCAAATACAACCTGGGGGCCGATTTCTCTCTGCCTGCCGAGGCCAAAGATAAAAAAATCATCCTG GTGCCGGGTCAGGTAGAAGACGATGCCTCAATTAAAACAGGCACTGTGTCGATTAAGAGCAACCTTGAGTTATTACGCAC AGTACGCGAGCGCAATCCGCACGCTTACATTATTTATAAACCGCACCCGGATGTACTGGTGGGGAATCGCAAGGGCAATA TTCCGACAGAACTAATTGCTGAACTCGCTGATTATCAGGCACTGGACGCAGATATTATTCAATGCATCCAGCGCGCAGAT GAAGTGCACACCATGACATCATTGTCCGGGTTTGAAGCGTTATTACATGGCAAGCAAGTTCATTGTTACGGCCTGCCCTT CTATGCCGGTTGGGGTTTAACCGTTGATGAACATCATTGCCCGCGCCGCGAGCGCAGATTAACGATAGCAGACTTGATCT ATCAGGCGTTGATTGTTTACCCAACATATATTCACCCAACACGGCTACAGCCTATTACGGTTGAGGAAGCTGCGGAATAT TTAATCCAGACGCCGCGTAAGCCGATGTTTATTACCCGAAAAAAAGCGGGGCGGGTAATACGCTATTACCGCAAATTAAT TATGTTCTGCAAGGTCAGATTTGGCTAA Protein sequence : MIGIYSPGIWRIPHLEKFLAQPCQKLSLLRPVPQNVDAIAVWGHRPSAAKPVAIAKAAGKPVIRLEDGFVRSLDLGVNGE PPLSLVVDDCGIYYDASKPSALEKLVQDKAGNAALADQAREAMHTIVTGDLSKYNLAPAFVADESERADIVLVVDQTFND MSVTYGNAGPHEFAAMLEAAMEENPQAEIWVKVHPDVLEGKKTGYFADLRATQRVRLIAENVSPQSLLRHVSRVYVVTSQ YGFEALLAGKPVTCFGQPWYAGWGLTDDRHPQSALLSARRGSATLEELFAAAYLRYCRYIDPLTGAASDLFTVLQWLQLQ RNHQQQRNGYLWAPGLTLWKSAILKPFLCTATNRLSYSRRCTAATACVVWGVKGEQQWLAEAQQKSLPLWRMEDGFLRSS GLGSDLLPPLSLVLDKRGIYYDATRPSDLEVLLNHSQLTLAQQMRAEKLRQRLVESKLSKYNLGADFSLPAEAKDKKIIL VPGQVEDDASIKTGTVSIKSNLELLRTVRERNPHAYIIYKPHPDVLVGNRKGNIPTELIAELADYQALDADIIQCIQRAD EVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDEHHCPRRERRLTIADLIYQALIVYPTYIHPTRLQPITVEEAAEY LIQTPRKPMFITRKKAGRVIRYYRKLIMFCKVRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 0.0 | 96 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 96 |
| lipA | NP_273145.1 | capsule polysaccharide modification protein | Not tested | IHT-A | Protein | 2e-125 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsC | NP_755565.1 | KpsC protein | VFG0259 | Protein | 9e-126 | 51 |
| kpsC | NP_755565.1 | KpsC protein | VFG0692 | Protein | 5e-117 | 47 |
| kpsC | NP_755565.1 | KpsC protein | VFG0704 | Protein | 3e-104 | 47 |
