Gene Information

Name : c3680 (c3680)
Accession : NP_755555.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3508458 - 3509303 bp
Length : 846 bp
Strand : +
Note : Escherichia coli O157:H7 ortholog: z1664

DNA sequence :
ATGTCTGATATCACAGCCTCCCGTCCGGAAGTGGTCAACGGGCATACGGAAGTTATCTGCTCAACCAGTATCCACCACAT
TCTGGCTGTACGAAAAAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCAGTTCTGACGGAAA
GCATTGGAGGTAAAACCACCCGGGACTGGGCCATGAAACAGGATTTTCGCTGCGGCTGCTGGCTCATGGAGAAACCTGAA
ACGGCAATGAAAGCCATCACCCGCAACCTTGACCGTGAAATCTGGCGTGACCTGATGCAACGTTCCAGGATGCTTTCCTT
AATGGATGCGCAGGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGCGAAGCGAACATTC
TGAGCACATTTAAACAACTGCACCAGAACAAGGATGAGGTGTTTGAGCGGGGAGTGATCAACGTCTTCAGGGGACTGAGC
TGGAATTATAAAACCAACTCTCCCTGTAAATTTGGAAGTAAAATCATTATCAACAATCTGGTGAGATGGGACCGGTGGAG
ATTTCATCTTATCACCGGACAACAGACTGACCGACTCGCCGATCTGGAAAGAATGCTACATCTGTTCAGCGACAAACCGA
TTCCCGACAACCGGGAAAACATCACTATTCGTCTGGATGGTCACATCCAGTCCGTTCAGGGTAAAGAGCGCTATGAAGAC
GAAATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGGAAACCAGAACTGGTTGACAGGCTAAA
TGACATAATTGCCAGGCACTATCCAAATGTATTAGCAGACAGGTAA

Protein sequence :
MSDITASRPEVVNGHTEVICSTSIHHILAVRKSTLLQIDTLIRQLAEISVLTESIGGKTTRDWAMKQDFRCGCWLMEKPE
TAMKAITRNLDREIWRDLMQRSRMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFKQLHQNKDEVFERGVINVFRGLS
WNYKTNSPCKFGSKIIINNLVRWDRWRFHLITGQQTDRLADLERMLHLFSDKPIPDNRENITIRLDGHIQSVQGKERYED
EMFSIRYFKKGSAHITFRKPELVDRLNDIIARHYPNVLADR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 4e-123 93
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 4e-123 93
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 9e-121 92
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 9e-122 91
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 2e-120 91
unnamed AAL57572.1 unknown Not tested LEE Protein 2e-120 91
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 3e-119 91
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 1e-120 90
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 9e-120 89
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 9e-120 89
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 7e-120 89
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 2e-119 88
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-116 87
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-116 87
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 5e-107 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c3680 NP_755555.1 hypothetical protein VFG1533 Protein 5e-121 92
c3680 NP_755555.1 hypothetical protein VFG0666 Protein 4e-120 89
c3680 NP_755555.1 hypothetical protein VFG1685 Protein 3e-107 85