Gene Information

Name : c3678 (c3678)
Accession : NP_755553.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3507671 - 3508159 bp
Length : 489 bp
Strand : +
Note : Escherichia coli O157:H7 ortholog: z1662

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCTGACAGCGTTAACGTACAGGCACTGAACATGGGGCGAATTGTCGTTGACGTCGA
TGGTGTTGAGCTTGCCGAACTGATTAACGTGGTCTGCGATAATGGCTACTCCCTTCGTGTTGTTGATGAATCTGACCGGA
CCTCAACAGACAGCACCCCCCCCTCTGCTGCCCTGAGCGGTATACGCTGTAGTACCGCGCATATCACGGAAACAGACAAC
GCCTGGCTGTACTCGCTGTCGCATCAGACGAATGACACCGGCGAATCAGAATGGATTCATTTTACAGGTAGCGGATATCT
GTTACGTACCGATGCGTGGTCATACCCGGTTCTGCGGCTTAAACGCCTGGGGCTGTCAAAAACGTTCCGCCGTCTGGTTG
TCACACTTACCCGACGTTATGGCGTCAGTCTCATTCATCTGGATGCCAGCGCTGAATGCCTGCCGGATTTACCCACTTTC
GACTGGTAA

Protein sequence :
MKLALTLEADSVNVQALNMGRIVVDVDGVELAELINVVCDNGYSLRVVDESDRTSTDSTPPSAALSGIRCSTAHITETDN
AWLYSLSHQTNDTGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLTRRYGVSLIHLDASAECLPDLPTF
DW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 1e-57 94
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 3e-54 92
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 4e-56 92
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 4e-56 92
unnamed AAL57574.1 unknown Not tested LEE Protein 2e-47 91
unnamed AAL08479.1 unknown Not tested SRL Protein 3e-55 91
unnamed AAC31487.1 L0008 Not tested LEE Protein 2e-55 91
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 2e-55 91
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 3e-55 91
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 3e-55 91
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-54 90
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 2e-53 90
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 7e-55 89
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 3e-54 89
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 6e-54 88
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-53 87
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-53 87
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 7e-54 86
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 7e-54 86
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 9e-53 85
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 3e-53 85
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 4e-53 85
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 5e-47 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c3678 NP_755553.1 hypothetical protein VFG1621 Protein 5e-58 94
c3678 NP_755553.1 hypothetical protein VFG0787 Protein 7e-56 91
c3678 NP_755553.1 hypothetical protein VFG1070 Protein 1e-55 91
c3678 NP_755553.1 hypothetical protein VFG1531 Protein 9e-54 90
c3678 NP_755553.1 hypothetical protein VFG1683 Protein 1e-54 89
c3678 NP_755553.1 hypothetical protein VFG0664 Protein 2e-54 86