Gene Information

Name : c3650 (c3650)
Accession : NP_755525.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 3486747 - 3487007 bp
Length : 261 bp
Strand : +
Note : Residues 11 to 86 of 86 are 96.05 pct identical to residues 17 to 92 of 92 from GenPept.129 : >gb|AAL08466.1| (AF326777) unknown [Shigella flexneri 2a]

DNA sequence :
TTGTTTTCATCACCAACGCCGGTTGAGATTAACAACATCCGGAGGAACATTCTCATGACCACCCCAGTTTCACTGATGGA
TGACCAGATGGTCGACATGGCGTTTATCACTCAACTGACTGGCCTGACCGATAAGTGGTTTTACAAACTCATCAGGGATG
GGGCCTTTCCGGCCCCCATCAAGCTGGGCCGCAGTTCCCGATGGCTGAAAAGTGAAGTGGAAGCCTGGCTGCAGGCGCGT
ATTGCACAGTCCCGTCCGTAA

Protein sequence :
MFSSPTPVEINNIRRNILMTTPVSLMDDQMVDMAFITQLTGLTDKWFYKLIRDGAFPAPIKLGRSSRWLKSEVEAWLQAR
IAQSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 3e-27 99
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 1e-26 96
unnamed AAL08466.1 unknown Not tested SRL Protein 4e-30 95
unnamed CAI43835.1 hypothetical protein Not tested LEE Protein 1e-29 94
unnamed ADD91712.1 putative transcriptional regulator AlpA Not tested PAI-I AL862 Protein 1e-29 94
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 2e-26 93
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 1e-26 93
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 2e-26 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c3650 NP_755525.1 hypothetical protein VFG1057 Protein 2e-30 95
c3650 NP_755525.1 hypothetical protein VFG0651 Protein 6e-27 93