Gene Information

Name : c3647 (c3647)
Accession : NP_755522.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3483812 - 3484267 bp
Length : 456 bp
Strand : -
Note : Residues 13 to 136 of 151 are 91.12 pct identical to residues 1 to 124 of 127 from GenPept.129 : >gb|AAK00467.1| (AF200692) unknown [Shigella flexneri 2a]

DNA sequence :
TTGCCTGCGTGTCGTCTGGCGGTAAGGAACCACACTATGTACGCAAAATCTTTTCTCGCACTTGATGGCAACGGACGTCT
GACCGGTGCCCGTACCGCACAGACCGCACCTTATGCTTACTACACCTGCCACCTTTGCGGCAGTGCACTCAGATACCACC
CGCAGCACGACACGGAACGTCCCTGGTTTGAACACACTGACGACGGGCTGACGGAGCACGCGCAGCAATGTCCTTATGTC
AGGCCGGAACGCAGAGAAATACGGTTGATTAAACGTCTGCAGCAATTCGTCCCGGATGCCTTACCCGTGGTACGTAAAGC
CAGCTGGTACTGCAGGCAATGTCACCACGATTATTATGGGGAGCAGTACTGCACACACTGCCAGACCGGGCGCTTCAGTG
AGGACGGGGAGCAGAATGAACGGTATAAAAACGGGGCTGGGGATCACGCCGGGTGA

Protein sequence :
MPACRLAVRNHTMYAKSFLALDGNGRLTGARTAQTAPYAYYTCHLCGSALRYHPQHDTERPWFEHTDDGLTEHAQQCPYV
RPERREIRLIKRLQQFVPDALPVVRKASWYCRQCHHDYYGEQYCTHCQTGRFSEDGEQNERYKNGAGDHAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 8e-51 94
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 5e-50 91
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 4e-49 91
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 1e-51 90
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 8e-52 90
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 6e-53 89
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 9e-53 89
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 9e-53 89
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 1e-46 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c3647 NP_755522.1 hypothetical protein VFG0645 Protein 2e-53 89