Gene Information

Name : c3565 (c3565)
Accession : NP_755440.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3414691 - 3415413 bp
Length : 723 bp
Strand : -
Note : Residues 6 to 232 of 240 are 47.16 pct identical to residues 12 to 240 of 247 from GenPept.129 : >gb|AAD36722.1|AE001807_13 (AE001807) response regulator DrrA [Thermotoga maritima]

DNA sequence : 
TTGATGAATAACGTAAAAAAAATACTGCTGATGGAAGATGATTATGATATTGCAGCTCTGTTGCGGCTTAATCTGCAGGA
TGAAGGGTATCAGATAGTTCATGAAGCGGATGGCGCCAGAGCTCGTTTATTACTAGACAAGCAGACCTGGGATGCCGTAA
TACTTGATCTTATGCTGCCTAATGTTAATGGGCTGGAGATTTGCCGTTATATCCGTCAGATGACCCGTTATCTGCCTGTG
ATTATCATCAGTGCCCGTACCAGCGAAACCCACCGCGTCCTGGGACTGGAAATGGGGGCTGATGACTATCTACCGAAACC
CTTTTCCATTCCGGAGCTGATTGCCCGCATCAAAGCGTTGTTTCGTCGTCAGGAAGCCATGGGGCAAAATATTCTCCTGG
CAGGTGGACTGATTTGCTGTCACGATCTGTGCATCAATCCATTTTCACGTGAAGTTCATTTGCATAATAAACAGGTTGAT
CTTACCCCACGCGAGTTTGATCTGCTGCTCTGGTTTGCACGTCATCCTGGCGAAGTTTTTTCCCGTCTTTCACTGCTGGA
TAATGTCTGGGGGTATCAGCATGAAGGATATGAGCATACAGTCAACACGCATATCAACCGTCTTCGTGCCAAAATTGAAC
AGGATGCAGCAGAGCCAAAGATGATCCAGACCGTCTGGGGAAAAGGGTATAGGTTTTCAGTTGACAATGCAGGAATGCGA
TAA

Protein sequence : 
MMNNVKKILLMEDDYDIAALLRLNLQDEGYQIVHEADGARARLLLDKQTWDAVILDLMLPNVNGLEICRYIRQMTRYLPV
IIISARTSETHRVLGLEMGADDYLPKPFSIPELIARIKALFRRQEAMGQNILLAGGLICCHDLCINPFSREVHLHNKQVD
LTPREFDLLLWFARHPGEVFSRLSLLDNVWGYQHEGYEHTVNTHINRLRAKIEQDAAEPKMIQTVWGKGYRFSVDNAGMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-112 100
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 8e-111 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c3565 NP_755440.1 response regulator AE015929.1.gene1106. Protein 2e-27 43
c3565 NP_755440.1 response regulator HE999704.1.gene2815. Protein 5e-42 42
c3565 NP_755440.1 response regulator NC_012469.1.7685629. Protein 3e-37 42
c3565 NP_755440.1 response regulator HE999704.1.gene1528. Protein 2e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c3565 NP_755440.1 response regulator VFG1702 Protein 1e-112 100
c3565 NP_755440.1 response regulator VFG1563 Protein 5e-111 99