Gene Information

Name : c0330 (c0330)
Accession : NP_752274.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Unknown
Product : deoxyribose operon repressor
Function : -
COG functional category : K : Transcription
COG ID : COG1349
EC number : -
Position : 300643 - 301428 bp
Length : 786 bp
Strand : -
Note : Residues 2 to 261 of 261 are 83.58 pct identical to residues 1 to 261 of 261 from GenPept.129 : >gb|AAL22652.1| (AE008876) regulatory protein, deoR family [Salmonella typhimurium LT2]

DNA sequence :
TTGATGGAAACGAAGCAAAAAGAGCGTATCCGACGTTTGATTGAAATACTTAAGAAAACCGACAGAATCCATTTGAAAGA
CGCGGCACGAATGCTGGAAGTTTCTGTAATGACTATTCGTCGCGATCTCCATCAGGAAGATGAACCTCTGCCACTGACCC
TACTGGGTGGCTATATTGTAATGGTGCATAAACCCGCACCATCCATGCCAGTAATCCAGGACGTTCCGAGAAATCATCGT
GATGACTTACCTATTGCAATTCTGGCCGCCGGAATGGTTAATGAAAATGATCTGATCTTCTTTGATAATGGCCAGGAGAT
ACCGCTCGTTATAAGCATGATCCCGGATGCAATCACCTTCACTGGCATCTGTTACTCACATCGTGTCTTTGTTGCGTTGA
ATGAAAAACCTAATGTGACAGCAATACTTTGTGGTGGTACGTATCGTGCCAGAAGTGATGCTTTTTACGATGCCAGTAAC
TCTTCGCCATTAGACTCTCTCAATCCGCGAAAAATATTTATTTCCGCCAGCGGTGTACATGATCACTTTGGCGTCAGCTG
GTTTAATCCCGAAGATCTTGCCACTAAGCGTAAAGCGATGGCCCGTGGACTAAGGAAAATTTTGCTCGCCCGCCACGCCT
TGTTCGATGAAGTAGCCTCTGCCAGCCTCGCACCGCTCTCTGCATTTGATGTTCTGATTAGCGATCGTCCGTTACCGGCA
GATTATGTTACGCACTGCCGGAATGCTTCTGTAAAGGTCATTACACCTGATTCAGAAGACGAATGA

Protein sequence :
MMETKQKERIRRLIEILKKTDRIHLKDAARMLEVSVMTIRRDLHQEDEPLPLTLLGGYIVMVHKPAPSMPVIQDVPRNHR
DDLPIAILAAGMVNENDLIFFDNGQEIPLVISMIPDAITFTGICYSHRVFVALNEKPNVTAILCGGTYRARSDAFYDASN
SSPLDSLNPRKIFISASGVHDHFGVSWFNPEDLATKRKAMARGLRKILLARHALFDEVASASLAPLSAFDVLISDRPLPA
DYVTHCRNASVKVITPDSEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85174.1 hypothetical protein Not tested PAI V 536 Protein 6e-122 99
deoQ ADD91721.1 putative transcriptional regulator DeoQ Not tested PAI-I AL862 Protein 6e-122 99