Gene Information

Name : c0310 (c0310)
Accession : NP_752254.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 286352 - 286741 bp
Length : 390 bp
Strand : +
Note : Residues 3 to 129 of 129 are 88.97 pct identical to residues 1 to 127 of 127 from GenPept.129 : >gb|AAK00467.1| (AF200692) unknown [Shigella flexneri 2a]

DNA sequence : 
ATGACGATGTACGCAAAATCCTTTATTGCATTTGATGGCAATGGGCGTCTGACGGGTGCCCGTACCGCACAGACTGCACC
TTACGATCGCTACACTTGCCACCTTTGCGGCAGTGCGCTCAGATACCACCCGCAATACGACACTGAGCGTCCCTGGTTTG
AACACACTGACGACGGGCTGACGGAGCACGGTCAGCAGTGCCCTTATGTCAGACCGGAACGCAGGGAGATACAACTGATT
AAGCGTCTGCAGCAATTCGTACCGGATGCCTTACCCGTGGTGCGTAAAGCCAGCCGGCACTGCAGACAATGTCATCACGA
TTATTATGGGGAGCGGTACTGCACGCACTGCCATACCGGGCACTTCAGTGAGGAGGGGGTGGCAGAATGA

Protein sequence : 
MTMYAKSFIAFDGNGRLTGARTAQTAPYDRYTCHLCGSALRYHPQYDTERPWFEHTDDGLTEHGQQCPYVRPERREIQLI
KRLQQFVPDALPVVRKASRHCRQCHHDYYGERYCTHCHTGHFSEEGVAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 4e-56 94
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 5e-52 93
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-51 93
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 2e-52 93
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 1e-52 92
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-51 91
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 8e-53 89
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 8e-53 89
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 5e-53 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c0310 NP_752254.1 hypothetical protein VFG0645 Protein 2e-53 89