Gene Information

Name : c0309 (c0309)
Accession : NP_752253.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1743
EC number : -
Position : 285387 - 285986 bp
Length : 600 bp
Strand : +
Note : Escherichia coli O157:H7 ortholog: z1567

DNA sequence : 
ATGAAGACTTACAACACCAATCCCGGTTACGAAATGGATCCCCAGCTCCTGACACACTTTAACCAGCATCTGGATTCATT
ATTCGGGGTATATTCGAAACTGTTACCGTTCAGAATGGATTTTGCTTACCGAAAAAACACCCTCAGCTACAGGTGTGCCT
GCAGGTACGCCATGTGTGCGGAGATACTGCGACTGATTAACGAAGTGGGAGAGAAACTGGTCGGGTATGCCTGGGTAATG
GAATATACGGAACGTAAAGGGCTTCACATTCATTTTGTGGGCTATCTGAACGGTCAGAGCCACAGGAGTTCGTATCTGGT
ATCCAGATTGATGGGAGATATCTGGAGGCGGGTTACCGGGGGGGATGGTTACTACCACTGGTGCCGGTTTAATAAAAATT
ATCCGGTAAACATTAACCACGTCATTCACTATTCAGATCACAAAGCGGTGAATGCCTTACGCTATGCCCTCAGCTACCTG
GCCAAACGAGAACAGAAAGAATGTGGCATCATCCTGAAATGCAGCGGGCTTCCTGAAAAAAGTAACCGGGGTCGACCGCG
ACTGGGCAGCACCCTGCCGGAGACTTATTCTCTGGTGTAA

Protein sequence : 
MKTYNTNPGYEMDPQLLTHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCAEILRLINEVGEKLVGYAWVM
EYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTGGDGYYHWCRFNKNYPVNINHVIHYSDHKAVNALRYALSYL
AKREQKECGIILKCSGLPEKSNRGRPRLGSTLPETYSLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAE85184.1 hypothetical protein Not tested PAI V 536 Protein 3e-86 100
SF2982 NP_708756.1 hypothetical protein Not tested SHI-1 Protein 4e-87 92
S3187 NP_838470.1 hypothetical protein Not tested SHI-1 Protein 4e-87 92
Z1128 NP_286663.1 hypothetical protein Not tested TAI Protein 6e-58 64
Z1567 NP_287071.1 hypothetical protein Not tested TAI Protein 6e-58 64
unnamed AAL08430.1 unknown Not tested SRL Protein 1e-56 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c0309 NP_752253.1 hypothetical protein VFG0646 Protein 1e-87 92
c0309 NP_752253.1 hypothetical protein VFG1021 Protein 5e-57 62