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Name : yfcS (c2882) Accession : NP_754764.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Virulence Product : fimbrial chaperone yfcS Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 2733654 - 2734406 bp Length : 753 bp Strand : - Note : Escherichia coli K-12 ortholog: b2336; Escherichia coli O157:H7 ortholog: z3599 DNA sequence : ATGTCTTATAAATTATCCTGTCCAATGCTCGTCAGCACAGCGCTGATGGCACTGCTTACCACCGCCAGCCTGACGGCGCA TGCATCGGTCACCCCGGATCGCACCCGTCTGGTGTTTAACGAAAGCGATAAATCGATCAGCGTGACGTTGCGTAACAACA ACGAAAAGCTGCCTTACCTGGCGCAAAGCTGGCTGGAAGACGAGAAGGGCAACAAAATCACTTCGCCGCTGGCAGTACTG CCGCCGGTGCAGCGTATTGACGCTATGATGAACGGCCAGGTGAAGATTCAGGCGCTGCCGGACATTCACACACTGCCGTC CGACCGAGAAAGCCTGTTCTACTACAACGTGCGTGAGATCCCGCCAAAGTCCGGGAAAGCCAACACCCTGCAAATTGCGC TGCAAACGCGCATCAAGCTGTTCTGGCGACCAAAGGCGCTGGAGAAGATTGACATGAGAAGACCGTGGCAGTTTAAGGTC ACACTCACGCGCAGTGGCCAGGACTATACCGTCAATAACCCGACGCCGTACCACGTCATCATCAGCGATGCCAGCACACA GAAGAAAGGGCTGACTGCCGCCGGGTTTAAACCGCTGGTGATGCCACCGAAAACGTCACAACCGTTAAAGGCAAAAATGG CGAGCGCCCCGGTGCTGACCTATATCAACGACTACGGCGCGCGCATGCCGCTGATCTTCCGTTGTGAAGGGAACACCTGC AAGGTGGATGAAGATCAAAGCAGCAAAGGTTGA Protein sequence : MSYKLSCPMLVSTALMALLTTASLTAHASVTPDRTRLVFNESDKSISVTLRNNNEKLPYLAQSWLEDEKGNKITSPLAVL PPVQRIDAMMNGQVKIQALPDIHTLPSDRESLFYYNVREIPPKSGKANTLQIALQTRIKLFWRPKALEKIDMRRPWQFKV TLTRSGQDYTVNNPTPYHVIISDASTQKKGLTAAGFKPLVMPPKTSQPLKAKMASAPVLTYINDYGARMPLIFRCEGNTC KVDEDQSSKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 3e-47 | 46 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 1e-46 | 46 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 8e-47 | 46 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 3e-47 | 46 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 1e-46 | 45 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 1e-46 | 45 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 1e-46 | 45 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 3e-42 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| yfcS | NP_754764.1 | fimbrial chaperone yfcS | VFG1547 | Protein | 2e-47 | 46 |
| yfcS | NP_754764.1 | fimbrial chaperone yfcS | VFG0896 | Protein | 6e-47 | 45 |
| yfcS | NP_754764.1 | fimbrial chaperone yfcS | VFG0885 | Protein | 1e-42 | 44 |
