Gene Information

Name : c0279 (c0279)
Accession : NP_752223.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 261777 - 262010 bp
Length : 234 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b0249

DNA sequence :
ATGAGGGGCTGTACATTACTCTTATTTTCCGAAGCCCCTTTCTTACGCGAACAGGAGGTTGCTGTCATAACAGCTTACCG
CAATGTGTTTATCCAGGATGACCCGGGAATGCATTTCCGTTGGGTTATCCGCAACGCGGAAGGTCAGCGACGCTGGCGCT
GCCGGAATTCTGAACCCGATGCCGGAAAGGTGCTTAATACGCGGCTCGCCAGTGACGGTCCTCTAAGACAATAA

Protein sequence :
MRGCTLLLFSEAPFLREQEVAVITAYRNVFIQDDPGMHFRWVIRNAEGQRRWRCRNSEPDAGKVLNTRLASDGPLRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43842.1 hypothetical protein Not tested LEE Protein 2e-23 81
aec70 AAW51753.1 Aec70 Not tested AGI-3 Protein 2e-23 81
ykfF ADD91705.1 YkfF Not tested PAI-I AL862 Protein 2e-23 81
unnamed AAL67351.1 intergenic-region protein Not tested PAI II CFT073 Protein 3e-23 79
unnamed CAD33784.1 hypothetical protein Not tested PAI I 536 Protein 2e-18 69
ORF_46 AAZ04455.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-18 69
ykfF CAE85198.1 YkfF protein Not tested PAI V 536 Protein 3e-17 68
c5157 NP_757005.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-17 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c0279 NP_752223.1 hypothetical protein VFG1525 Protein 8e-19 69