Gene Information

Name : c0270 (c0270)
Accession : NP_752214.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 258181 - 258645 bp
Length : 465 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b2004; Escherichia coli O157:H7 ortholog: z1658

DNA sequence :
ATGCATATACCTTCACCGAAGCCGGTCTCCACGCCGGCTGACCTGTCATCGTTAAACTATCATTCACCGATTTTCTGTGA
GGACTTTATCGTGTCAGACACGCTCCATGAAACAAATTATCCCGACGACAACAACGACCGCCCCTGGTGGGGGCTACCCT
GCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGCAATCAGTTGCATTACCTTGCCGACCGCGCCGGTATC
AGAGGGCAGTTCAGCGACGCGGATGCATACCATCTGGACCAGGCTTTTCCACTGCTGATGAAACAACTGGAACTCATGCT
CACCATCGGTGAACTGAATCCCCGCCATCAGCATACCGTCACGCTGTATGCCAGAGGGCTGACCTGCGAAGCCGACACCC
TCGGCAGCTGTGGTTACGTTTATATGGCTGTTTATCCGACACTGGCACCCGCAACCACCTCATAA

Protein sequence :
MHIPSPKPVSTPADLSSLNYHSPIFCEDFIVSDTLHETNYPDDNNDRPWWGLPCTVTPCFGARLVQEGNQLHYLADRAGI
RGQFSDADAYHLDQAFPLLMKQLELMLTIGELNPRHQHTVTLYARGLTCEADTLGSCGYVYMAVYPTLAPATTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67343.1 intergenic-region protein Not tested PAI II CFT073 Protein 1e-69 100
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 2e-53 97
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 3e-48 92
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-51 91
yeeU CAE85203.1 YeeU protein Not tested PAI V 536 Protein 2e-51 91
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 2e-47 90
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 4e-46 89
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 4e-47 89
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 1e-47 89
Z1220 NP_286755.1 structural protein Not tested TAI Protein 4e-47 87
Z1658 NP_287161.1 structural protein Not tested TAI Protein 4e-47 87
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 3e-48 87
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 3e-48 87
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 6e-49 87
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-53 87
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-53 87
unnamed CAI43903.1 hypothetical protein Not tested LEE Protein 1e-56 86
unnamed AAL57576.1 unknown Not tested LEE Protein 2e-56 85
unnamed AAL08477.1 unknown Not tested SRL Protein 1e-46 84

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c0270 NP_752214.1 hypothetical protein VFG1619 Protein 1e-48 92
c0270 NP_752214.1 hypothetical protein VFG1681 Protein 2e-46 89
c0270 NP_752214.1 hypothetical protein VFG0662 Protein 1e-48 87
c0270 NP_752214.1 hypothetical protein VFG1068 Protein 4e-47 84