Gene Information

Name : c0255 (c0255)
Accession : NP_752201.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 249162 - 249608 bp
Length : 447 bp
Strand : -
Note : Residues 1 to 148 of 148 are 70.94 pct identical to residues 1 to 148 of 174 from GenPept.129 : >gb|AAL67385.1|AF447814_53 (AF447814) L0010-like protein [Escherichia coli]

DNA sequence : 
ATGTCAGAACCTACTCTCACCAACCCCGAAGTATTAACCGATCATACCGATGTGATTTGCTCCACCAGTATTGAACGCAT
CGTCACCGGACGTAATGCGGCGCTGACACAGATTGAAGCATTGCTCCACCAGATTAACGATATTTCGACACAAACCCTCA
GTATCGGCGGAAAAACCGCCCTGGACTGGGTCATGAAACAGGATTTTCGCTGTGGTTGCTGGCTTATGGAGAAGCCTGAA
ACAGCGATGAAAGCCATTACCCGCAATCTCGATCGCGGTAAATGGCGGGATTTAATGAAACGCTCAGGGATGCTGTCGAT
TATGGACGCTCAGGCCCGTAACCAGTGGTACAACAGCCTAGAAAAGGATGATATTCCGGTGGTCAGCGAAGCGAATATTC
TGAGCACCTTTAAGCAACTGCATTTGAACAAGGGTGAGGTGTTTTAG

Protein sequence : 
MSEPTLTNPEVLTDHTDVICSTSIERIVTGRNAALTQIEALLHQINDISTQTLSIGGKTALDWVMKQDFRCGCWLMEKPE
TAMKAITRNLDRGKWRDLMKRSGMLSIMDAQARNQWYNSLEKDDIPVVSEANILSTFKQLHLNKGEVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5146 NP_756994.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-46 71
unnamed AAL67385.1 L0010-like protein Not tested PAI II CFT073 Protein 1e-46 71
Z5094 NP_290245.1 hypothetical protein Not tested LEE Protein 1e-31 70
ECs4542 NP_312569.1 hypothetical protein Not tested LEE Protein 1e-31 70
unnamed AAC31489.1 L0010 Not tested LEE Protein 7e-32 70
unnamed ACU09436.1 conserved hypothetical protein Not tested LEE Protein 7e-32 70
unnamed AAL08481.1 unknown Not tested SRL Protein 8e-47 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c0255 NP_752201.1 hypothetical protein VFG0789 Protein 3e-32 70
c0255 NP_752201.1 hypothetical protein VFG1072 Protein 3e-47 70