Gene Information

Name : c2527 (c2527)
Accession : NP_754414.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2365275 - 2365760 bp
Length : 486 bp
Strand : +
Note : Escherichia coli K-12 ortholog: b0248; Escherichia coli O157:H7 ortholog: z1656

DNA sequence :
ATGACAACCTCTTCGCATAATTCCACCACACCTTCTGTTTCCGTGGCCGCTGCATCAGGGAATAACCAGTCTCAGTTGGT
TGCCACTCCCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTCACCCTGG
AGCCCCGTGTCTTCGGCTGGATGGACCGTCTGTATGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC
GGTGGCGCATTTATGGCACCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGTAACCG
CGCTGAAATGAGCCCGGAAGCCGCCGGCATTGCTGCCTGTCTGATGACGTACAGTCATCACGCCTGCCGTACGGAGTGTT
ATGCCATGACGGTTCATTATTACCGTCTGCGGGATTACGCCCTGCAACATCCGGAATACGACGCCATTATGCGCATCATT
GACTGA

Protein sequence :
MTTSSHNSTTPSVSVAAASGNNQSQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLYEDYCGGIWNLYTLNN
GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPEYDAIMRII
D

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3588 YP_003223445.1 hypothetical protein Not tested LEE Protein 2e-60 97
unnamed AAL67346.1 intergenic-region protein Not tested PAI II CFT073 Protein 4e-56 97
Z1216 NP_286751.1 hypothetical protein Not tested TAI Protein 4e-61 96
Z1656 NP_287159.1 hypothetical protein Not tested TAI Protein 4e-61 96
unnamed CAD66202.1 hypothetical protein Not tested PAI III 536 Protein 2e-66 96
unnamed CAI43899.1 hypothetical protein Not tested LEE Protein 6e-56 96
unnamed CAD42097.1 hypothetical protein Not tested PAI II 536 Protein 9e-65 95
yfjX CAE85200.1 YfjX protein Not tested PAI V 536 Protein 5e-59 94
SF2995 NP_708769.2 hypothetical protein Not tested SHI-1 Protein 5e-56 94
S3200 NP_838483.1 hypothetical protein Not tested SHI-1 Protein 5e-56 94
z1216 CAD33786.1 Z1216 protein Not tested PAI I 536 Protein 2e-65 93
yfjX ADD91703.1 YfjX Not tested PAI-I AL862 Protein 7e-63 92
unnamed CAI43844.1 hypothetical protein Not tested LEE Protein 3e-64 92
aec72 AAW51755.1 Aec72 Not tested AGI-3 Protein 1e-62 91
ORF_48 AAZ04457.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 9e-58 89
yfjX YP_854322.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-57 89
c5155 NP_757003.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-57 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c2527 NP_754414.1 hypothetical protein VFG1677 Protein 6e-67 96
c2527 NP_754414.1 hypothetical protein VFG1616 Protein 4e-65 95
c2527 NP_754414.1 hypothetical protein VFG0659 Protein 1e-56 94
c2527 NP_754414.1 hypothetical protein VFG1527 Protein 8e-66 93