Gene Information

Name : c2472 (c2472)
Accession : NP_754364.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2315404 - 2315670 bp
Length : 267 bp
Strand : +
Note : Residues 1 to 88 of 88 are 71.59 pct identical to residues 1 to 88 of 88 from SwissProt.40 : >sp|Q00931|LCRS_YERPE Low calcium response locus protein S

DNA sequence :
ATGCGTAAAGCCCGTTTTACTGAGCATCAGATCATCGCCGTGATTAAGTCGGTTGAAGCCGGACGAACTGTTAAAGATGT
CTGTCGCGAGGCCGGAATCTCTGAAGCCACCTATTACAACTGGAAGTCCAAATACGGCGGCATGGAGGCTTCTGATATTA
AGAAAATCAAGGATCTTGAGGACGAGAACCGCCGTCTAAAACAAATGTTTGCCGACCTGAGTCTGGAGAACCGGGCGCTG
AAAGACGTTATCGAAAAAAAGCTTTAA

Protein sequence :
MRKARFTEHQIIAVIKSVEAGRTVKDVCREAGISEATYYNWKSKYGGMEASDIKKIKDLEDENRRLKQMFADLSLENRAL
KDVIEKKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 8e-34 93
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 5e-21 54
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 7e-21 54
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 3e-17 50
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 5e-17 50
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 3e-17 50
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 6e-17 49