Gene Information

Name : c2423 (c2423)
Accession : NP_754315.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : AraC type regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2225978 - 2226937 bp
Length : 960 bp
Strand : +
Note : Similar to YbtA, AraC type regulator [Yersinia pestis]; Residues 1 to 319 of 319 are 99.37 pct identical to residues 1 to 319 of 319 from GenPept.129 : >emb|CAC90728.1| (AJ414150) transcriptional regulator YbtA [Yersinia pestis]

DNA sequence :
ATGATGGAGTCACCGCAAACGCAATCTGAAATCTCTATTCACCAGTTGGTGGTCGGGAAACCTGCAAACGATGGCAATAT
TCCTGCTCAGTGTGAACTGCTGCGCTGTTCGTTGCAGGAAGGTATGGATATTTTGCTCTGGAGGGGCCATTTTGCGCGGC
CTGAGACGTTGCAGCTACACGACGATCTGGGCAGGATTAACTTCTCGTGCATCCTGGAAGGCACATCGCGCTTTGCGATT
CAGGGACTCCGGCGCCACACCGACTGGGAGCTTGCGCGCAATCGCCATTACATTACCCATACGCCAGACTGTCGCGGCAG
CGCCTCCTATTGTGGCCGATTCGAGAGCATTACCCTCTCCTTCAGCCCTGAAACCCTCGCGCTGTGGGTGCCGGATATTA
GCGCGGTCATTAAGAATAAGATCGACTCCCACTGCTGTTGCCAGCAGCAGCGTTGTAATGCTGAAACCCACTTAACGGCT
CAGGCCTTGCGTCACGCGCTGATGCGCATGCACGGCGGCTTCAGTCATGAACAAAAGCCGTCGACGCTATGGTTGCAGGG
GCAAAGTCTGGTCATGCTCAGTCTGGTGCTGGATGAACATCGCGAAGACGCCAGTTGCCTCTCCTGCCACTTCAACCCGA
TGGAACGCCAGAAACTGCTGCGGGCGAAGGATCTGCTGCTGGCTGATCTGACGCAAGCGCCGGGCGTCGCGGAGTTGGCC
AGAGAGTCCGGTCTGAGCGTTCTCAAAATTAAGCGAGGCTTCCGCGTTCTGTTCAACAACAGCGTCTATGGCCTGTTTCA
GGCTGAACGAATGCAGGAAGCCAGAAGACGCCTGGCCAACGGCAATACCTCCGTCATGACGGTGGCGGCCGATCTGGGCT
ATGCCAACGCCAGCCATTTCTCTGCCGCCTTCCAGAAACAGTTTGGCGTAACTCCTTCGACCTTTAAACGCGGGATGTAA

Protein sequence :
MMESPQTQSEISIHQLVVGKPANDGNIPAQCELLRCSLQEGMDILLWRGHFARPETLQLHDDLGRINFSCILEGTSRFAI
QGLRRHTDWELARNRHYITHTPDCRGSASYCGRFESITLSFSPETLALWVPDISAVIKNKIDSHCCCQQQRCNAETHLTA
QALRHALMRMHGGFSHEQKPSTLWLQGQSLVMLSLVLDEHREDASCLSCHFNPMERQKLLRAKDLLLADLTQAPGVAELA
RESGLSVLKIKRGFRVLFNNSVYGLFQAERMQEARRRLANGNTSVMTVAADLGYANASHFSAAFQKQFGVTPSTFKRGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtA NP_993008.1 transcriptional regulator YbtA Virulence HPI Protein 3e-139 99
ybtA YP_070125.1 transcriptional regulator YbtA Virulence HPI Protein 3e-139 99
ybtA CAA21389.1 - Virulence HPI Protein 3e-139 99
APECO1_1057 YP_853074.1 AraC family transcriptional regulator Not tested PAI IV APEC-O1 Protein 6e-140 99
ybtA CAB46574.1 yersiniabactin transcriptional regulator, YbtA Virulence HPI Protein 8e-138 99
ybtA YP_001006814.1 transcriptional regulator YbtA Not tested HPI Protein 1e-137 99
ybtA YP_002346903.1 transcriptional regulator YbtA Virulence HPI Protein 3e-139 99
ybtA NP_669705.1 AraC family transcriptional regulator Virulence HPI Protein 3e-139 99