Gene Information

Name : c1935 (c1935)
Accession : NP_753831.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : chaperone protein fimC
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1777225 - 1777935 bp
Length : 711 bp
Strand : -
Note : Escherichia coli K-12 ortholog: b4316; Escherichia coli O157:H7 ortholog: z2201

DNA sequence : 
ATGCAAACTACGCGTACCCCCTACTCTGTTTCCTTTATGGCGACAGTGTTACTTTTATTGCTCTTTGCTTGCCATAGCAC
CATTGCCAACGCAGCTGTCGCACTTGGTGCGACGCGGGTAATTTATCCGGCAAACCAGAAACAGGTTTTATTGCCTGTCA
CGAATAATGATCCTGCCAGTGTCTATCTCATTCAGTCATGGATAGAAAATGCGGGTGACCAGAAAGATACCCAGTTTGTC
ATTACCCCACCGCTTTTTTCCATGCAAGGTAAAAAAGAGAATACGCTTCGGATAATCAACGCCACTAATCATCAGTTACC
AGGCGACCGTGAAAGCCTGTTCTGGGTTAATGTTAAAGCTATCCCTGCTATGGAAAAAGACCAGAAGAATGAGAATACAT
TACAGCTGGCAATTATTAGCCGCATAAAAATGTTTTATCGCCCCACGCATCTGGCAATGGCACCTGAAGAAGCGCCTGCA
ATGCTTCGGTTTCGTCGCAGCGGTAGCAAACTCACTCTTATTAATCCAACGCCCTACTTCATTACCGTAACAAATATGAA
AGCAGGAAATAGCAATCTCCCAAACACCATGGTGCCGCCAAAAGGTGAAGTATCGGTGGATATCCCGCATGCTGTAACCG
GGGATATCAGTTTTCAGACAATCAATGATTACGGTGCATTAACTCCGCGTATTAAGGCAACCATGCAGTAA

Protein sequence : 
MQTTRTPYSVSFMATVLLLLLFACHSTIANAAVALGATRVIYPANQKQVLLPVTNNDPASVYLIQSWIENAGDQKDTQFV
ITPPLFSMQGKKENTLRIINATNHQLPGDRESLFWVNVKAIPAMEKDQKNENTLQLAIISRIKMFYRPTHLAMAPEEAPA
MLRFRRSGSKLTLINPTPYFITVTNMKAGNSNLPNTMVPPKGEVSVDIPHAVTGDISFQTINDYGALTPRIKATMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 9e-68 65
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-65 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c1935 NP_753831.1 chaperone protein fimC VFG1644 Protein 6e-66 64
c1935 NP_753831.1 chaperone protein fimC VFG0911 Protein 3e-66 64
c1935 NP_753831.1 chaperone protein fimC VFG0875 Protein 5e-70 59
c1935 NP_753831.1 chaperone protein fimC VFG0445 Protein 6e-58 48