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Name : c1888 (c1888) Accession : NP_753786.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 1722209 - 1724614 bp Length : 2406 bp Strand : + Note : Escherichia coli O157:H7 ortholog: z0267 DNA sequence : ATGTCCTTAAAAGGTCTTCGCTTTACGCTGGAGGTTGACGGCCAGGAGCCGGACACCTTTGCAGTGGTGAATTTCAGGTT AATCCAGAACCAGTCTTATCCGTTTGTGATGAGTGTGGATGTCGCCAGCGATTCTTTTATGCAGACGGCGGAGATGCTGC TGGAGAAGAACGCAACGCTGACTATCTGGCAGGGCGTCATTCCGCAGCGTTATGTCACCGGCGTGGTGGCGGGGTTTGGT ATGCAGGAGAACAACGGCTGGCAGATGCGTTATCACCTGCGTATTGAGCCGCCGTTATGGCGGTGCGGGCTGCGGCGGAA CTTCCGTATCTTCCAGCAGCAGGATATCCGGACGATATCGGCCATGCTGCTGAACGAGAACGGCGTCACAGAGTGGACGC CGCTGTTTTATGAGGACCATCCGGCGCGGGAGTTCTGTGTCCAGTACGGGGAAAGCGACCTGGCGTTTCTGGCGCGGCTG TGGGCGGAGGAGGGGATTTTCTTCTTTGAGCGGTTTGCGGCGGACAGTCCGGAGCAGAAGCTGACGCTGTGCGACGATGT GGCGGGGCTGTCACAGGCGGGGGAGCTTCCGTTTAACCCGGACACATCGGCAGGAGCGGAGACGGAGTGTGTCAGTATGT TCCGTTATGAGGCGCATGTCCGCCCGTCATCGGTGCAGAGCCAGGATTACACGTTTAAGGTGCCGGACTGGCCGGGGATG TATGAGCAGCAGGGTGAGAGCCTGAACGGACAGCTTGAACAGTATGAAATATTTGATTATCCGGGAAGGTACAAGGATGA ACAGCACGGCAAGGATTTCACGCTGTACCGGATGGAGAGCCTGCGCAGTGATGCGGAAAAGGCCACAGGGCAGAGTAATT CGCCGAAGCTGTGGCCGGGAACGCGGTTTACGCTGACGGGGCATCCGCAGAAGATGCTGAACCGTGAATGGCAGGTGGTA CAGAGCATTCTGTCAGGAGACCAGCCGCAGGCGCTTCACGGCAGCCAGGGGAGAGGAACCACGCTGGGCAATCAGTTAGA GGTGATACCGGCGGACCGGACGTGGCGTCCACGGCAGCAAAGCAAACCGAAGGTGGACGGGCCACAGAGCGCCATTGTCA CCGGTCCCGCAGGAGAGGAAATCTTCTGCGACGAACATGGTCGGGTACGGGTGAAGTTTCACTGGGACCGTTATCACGGG ATGACGGAGGAGAGTTCGTGCTGGGTGCGTGTGTCGCAGGCGTGGGCGGGGCCGGGATTTGGTAATCTGGCGATACCGCG GGTGGGCCAGGAGGTGATTGTTGATTTTCTGAACGGGGACCCGGACCAGCCGCTGGTCATGGGCCGGACGTACCATGAGG ACAACCGTTCGCCGGGGGACCTGCCGGGAACGAAGACGCAGATGACGATACGGTCGAAGACCTATAAAGGAAGCGGTTTT AATGAGTTGCGCTTTGAGGATGCGACGGATAAGGAACAGGTCTATATCCACGCGCAGAAGAACATGGACACGGAGGTACT TAACGACCGGACGACGGATGTGAAACATGACCATACGGAGACCATCGGGAACGACCAGAAGATAACGGTGGTGAAGGGGC AGACGGTTCAGGTCGGGACCAGAAAAGAAGGGGGCCACGACCAGAGTATCACGGTGGCGAATGACCGGCGCATAACGGTA CGCAACGACCAGACGCTGAAGGTGACGAACGACCGGACGGTGAGCGTGAGTCATGATGACGGCCTGTACGTCAGAAATGA CCGTAGGGTGACGGTGAAAGGGAAGCAGGAGCATAAGACGACGGGGAACCATGTCAGCCTGGTGGAGGGAAAGCACAGCC TGGTGGTGAAGGGGGACCTGGCGAGGAAGGTGAGTGGCGCGCTGGGGATAAAGGTGGACGGGGAAATCGTGCTGGAGAGC AGCAGCCGGATAAGCCTGAAAGTGGGTGGTTCGTTTGTGGTCATCCATTCAGGGGGCGTGGACATCGTCGGGCCGAAAAT CAATCTCAATAGCGGCGGTAGTCCGGGAACGCCGGTGCCGACGCTGCAACCGACGGTGCTGAAGACACCGGGGGGTGAGA AGAGTGGTGATGGCAGTGACTCCGGAGAAGAAAATGAAGACCCTGGAGGGAGCGGCTTGGCCGGAAGTGGTGGTGGTGAT CGAGGTGACGATGAGGATGAACCTGAAAAATATACTCTCCAGTTCCATTTTACAGACGATGACGGGATACCGTATTCAGA AATACGCTACATTGCCTTCTTTGAGGACGGTGCGCAGATTCGCGGTGAAACGGACAAGGACGGGTATACAGAAGTTTTCT CTAGAACCAATGATGCAAATGTAGAAATTAAACTGTTAACTAATGATTATTATATATTTGAGGTGAATTGTAATGAGCAC CAGTAA Protein sequence : MSLKGLRFTLEVDGQEPDTFAVVNFRLIQNQSYPFVMSVDVASDSFMQTAEMLLEKNATLTIWQGVIPQRYVTGVVAGFG MQENNGWQMRYHLRIEPPLWRCGLRRNFRIFQQQDIRTISAMLLNENGVTEWTPLFYEDHPAREFCVQYGESDLAFLARL WAEEGIFFFERFAADSPEQKLTLCDDVAGLSQAGELPFNPDTSAGAETECVSMFRYEAHVRPSSVQSQDYTFKVPDWPGM YEQQGESLNGQLEQYEIFDYPGRYKDEQHGKDFTLYRMESLRSDAEKATGQSNSPKLWPGTRFTLTGHPQKMLNREWQVV QSILSGDQPQALHGSQGRGTTLGNQLEVIPADRTWRPRQQSKPKVDGPQSAIVTGPAGEEIFCDEHGRVRVKFHWDRYHG MTEESSCWVRVSQAWAGPGFGNLAIPRVGQEVIVDFLNGDPDQPLVMGRTYHEDNRSPGDLPGTKTQMTIRSKTYKGSGF NELRFEDATDKEQVYIHAQKNMDTEVLNDRTTDVKHDHTETIGNDQKITVVKGQTVQVGTRKEGGHDQSITVANDRRITV RNDQTLKVTNDRTVSVSHDDGLYVRNDRRVTVKGKQEHKTTGNHVSLVEGKHSLVVKGDLARKVSGALGIKVDGEIVLES SSRISLKVGGSFVVIHSGGVDIVGPKINLNSGGSPGTPVPTLQPTVLKTPGGEKSGDGSDSGEENEDPGGSGLAGSGGGD RGDDEDEPEKYTLQFHFTDDDGIPYSEIRYIAFFEDGAQIRGETDKDGYTEVFSRTNDANVEIKLLTNDYYIFEVNCNEH Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 0.0 | 84 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 84 |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 1e-129 | 46 |
