Gene Information

Name : c1290 (c1290)
Accession : NP_753203.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1239076 - 1239273 bp
Length : 198 bp
Strand : +
Note : Escherichia coli O157:H7 ortholog: z1663

DNA sequence : 
ATGAAATTATTAACCACAGAAACGGCGCTGGATATTCTGATTGCGTGGCTGCAGGACAATATTGACTGCGAATCAGGGAT
TATCTTCGACAACGATGAGGATAAAACGGATTCGGCAGCACTGTTGCCCTGTATTGAACAGGCTAGGGAGGATATCCGTA
TCCTGCGCCAACTGCAGTTTCTGCAACAAAACCGGTGA

Protein sequence : 
MKLLTTETALDILIAWLQDNIDCESGIIFDNDEDKTDSAALLPCIEQAREDIRILRQLQFLQQNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK00484.1 unknown Not tested SHI-1 Protein 8e-17 100
SF3001 NP_708775.1 hypothetical protein Not tested SHI-1 Protein 1e-16 100
ECO111_3780 YP_003236115.1 hypothetical protein Not tested LEE Protein 6e-16 99
ECO103_3594 YP_003223451.1 hypothetical protein Not tested LEE Protein 6e-16 99
unnamed AAL08480.1 unknown Not tested SRL Protein 9e-16 97
Z1225 NP_286759.1 hypothetical protein Not tested TAI Protein 1e-15 97
c5147 NP_756995.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-15 95
unnamed AAL67387.1 L0009-like protein Not tested PAI II CFT073 Protein 1e-15 95
unnamed AAC31488.1 L0009 Not tested LEE Protein 2e-14 89
unnamed ACU09435.1 conserved hypothetical protein Not tested LEE Protein 2e-14 89
Z5093 NP_290244.1 hypothetical protein Not tested LEE Protein 3e-14 89
ECs4541 NP_312568.1 hypothetical protein Not tested LEE Protein 3e-14 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c1290 NP_753203.1 hypothetical protein VFG0665 Protein 3e-17 100
c1290 NP_753203.1 hypothetical protein VFG1071 Protein 4e-16 97
c1290 NP_753203.1 hypothetical protein VFG0788 Protein 1e-14 89