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Name : c1273 (c1273) Accession : NP_753187.1 Strain : Escherichia coli CFT073 Genome accession: NC_004431 Putative virulence/resistance : Virulence Product : antigen 43 Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3468 EC number : - Position : 1225454 - 1228729 bp Length : 3276 bp Strand : + Note : AG43; Sap; Escherichia coli K-12 ortholog: b2000; Escherichia coli O157:H7 ortholog: z1651 DNA sequence : ATGCAGACACACAGACATGAGATTCAGGGAACAACAGAGCCACACGTCAGAAACTTCCATCAGCCGGATCTGCGGCACTG TAACCCTTCACCTGCAGGTATCCACATTTGTGGATACCGGCTTTTTATTCACCCTCACTCTGATAAGGAAATGCTGATGA AACGACATCTGAATACCAGCTACAGGCTGGTATGGAATCACATTACAGGCGCTTTCGTGGTTGCCTCCGAACTGGCCCGT GCACGGGGGAAACGCGCCGGTGTGGCGGTTGCACTGTCTCTTGCCGCTGCCACGTCACTCCCGGCGCTGGCTGCTGACTC TGTTGTACCGGCAGGAGAAACCGTGAACGGTGGAACGCTGATAAATCACGACCGCCAGTTTGTCTCAGGTACGGCTGATG GAATGACTGTCAGCACCGGACTGGAGCTGGGGGCGGACTCTGATAACAACACCGGCGGTCAGCAGATAGCCCGGGGTGGA ACAGCCAGAAACACCAGAGTCACCGCAAACGGTCTACAGGATGTCATGGCAGGTGGCAGTACCTCGGATACGGTTATCAG TACCGGGGGAGGGCAGAATTTGCGTGGGAAGGCTTCCGGTACTGTCCTTAACGGCGGTGATCAATGGATACATGCAGGCG GCAGGGCATCCGGAACGGTGATTAACCAGGATGGTTACCAGACCATTAAACATGGCGGACTGGTAACCGGAACCATCGTC AACACCGGTGCAGAAGGTGGTCCGGATTCTGAAAATGTGTCCACCGGTCAGATGGTCGGGGGGATTGCTGAATCCACCAC CATAAACAAAAATGGCCGGCAGGTTATCTGGTCTTCGGGGATAGCCCGGGACACTCTCATTTACACAGGAGGTGACCAGA CGGTACACGGAGAGGCACATAACACCCGACTGGAGGGAGGGAACCAGTATGTGCACAAGTATGGACTTGCACTGAACACG GTAATTAACGAGGGGGGCTGGCAGGTTGTTAAGGCCGGTGGTACTGCCGGTAACACCACCATAAATCAGAACGGCGAGCT GAGGGTTCATGCCGGCGGTGAAGCGTCTGATGTCACCCAGAACACGGGAGGTGCACTGGTTACCAGCACTGCTGCAACTG TCACCGGTACAAACCGCCTGGGAGCATTCTCTGTTGTGGAGGGTAAAGCTGATAATGTCGTACTGGAAAATGGCGGACGT CTGGATGTGCTGAGCGGACACACAGCCACCAGAACCCTTGTGGATGATGGCGGAACGCTGGATGTCCGCAACGGTGGTAC CGCCACTGCCGTATCCATGGGAAATGGCGGGGTACTGCTGGCCGATTCCGGGGCCGCTGTCAGTGGTACCCGGAGCGACG GAACGGCATTCCGTATCGGGGGCGGTCAGGCGGATGCCCTGATGCTGGAAAAAGGCAGTTCATTCACGCTGAACGCCGGT GATACGGCCACGGATACCACGGTAAATGGCGGACTGTTCACTGCCAGAGGGGGCTCGCTGGCGGGCACCACCACGCTGAA TAACGGTGCCACGTTTACCCTTGCCGGGAAGACGGTGAACAACGATACCCTGACCATCCGTGAAGGTGATGCACTCCTGC AGGGAGGCGCTCTCACCGGTAACGGCAGGGTGGAAAAATCAGGAAGTGGCACACTCACTGTCAGCAACACCACACTCACC CAGAAAGCCGTCAACCTGAATGAAGGCACGCTGACGCTGAACGACAGTACCGTCACCACGGATATCATCGCTCATCGCGG CACGGCCCTGAAGCTGACCGGCAGCACAGTGCTGAACGGTGCCATTGACCCCACGAATGTCACCCTGACATCCGGTGCCA CCTGGAATATCCCCGATAACGCCACGGTTCAGTCGGTGGTGGATGACCTCAGCCATGCCGGACAGATTCATTTCACCTCC GCCCGCACAGGGAAGTTCGTTCCGACAACTCTGCAGGTGAAAAACCTGAACGGGCAGAATGGCACCATCAGCCTGCGTGT ACGCCCGGATATGGCGCAGAACAATGCTGACAGACTGGTCATTGACGGTGGCAGAGCAACCGGAAAAACCATCCTGAATC TGGTGAACGCCGGCAACAGTGGTACGGGTCTGGCGACCACCGGTAAGGGTATTCAGGTGGTTGAGGCCATTAACGGTGCC ACCACGGAGGAAGGGGCTTTTGTCCAGGGGAATATGCTGCAGGCCGGGGCCTTTAACTACACCCTCAACCGGGACAGTGA TGAGAGCTGGTATCTGCGCAGTGAAGAACGTTATCGTGCTGAAGTCCCCCTGTACGCCTCCATGCTGACACAGGCAATGG ACTATGACCGGATTCTGGCAGGCTCCCGCAGCCATCAGACCGGTGTAAACGGTGAAAATAACAGCGTCCGTCTCAGCATT CAGGGCGGCCATCTCGGTCACGATAACAACGGCGGTATTGCCCGTGGGGCCACGCCGGAAAGCAGCGGCAGCTATGGCTT CGTCCGTCTGGAGGGTGACCTGCTCAGAACAGAGGTCGCCGGTATGTCACTGACGACAGGAGTGTATGGTGCTGCAGGCC ATTCTTCCGTTGATGTTAAGGATGATGACGGCTCCCGCGCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATAT ATGAACCTGACACACACCTCCTCCGGCCTGTGGGCTGACATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCATC GGACAATAACGACTTCCGCGCACGGGGCCGGGGCTGGCTGGGCTCACTGGAAACCGGTCTGCCCTTCAGTATCACTGACA ACCTGATGCTGGAGCCACGGCTGCAGTACACCTGGCAGGGGCTTTCGCTGGATGACGGTAAGGACAACGCCGGTTATGTG AAGTTCGGGCATGGCAGTGCACAGCATGTGCGTGCCGGTTTCCGTCTGGGCAGCCACAACGATATGACCTTTGGTGAAGG CACCTCATCCCGTGCCCCCCTGCGTGACAGTGCAAAACACAGTGTGCGTGAACTGCCGGTGAACTGGTGGGTACAGCCTT CCGTTATCCGCACCTTCAGCTCCCGGGGTGATATGCGTGTGGGGACCTCCACCGCAGGCAGCGGGATGACGTTCTCTCCC TCACAGAATGGCACTTCACTGGATCTGCAGGCCGGACTGGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGC CGGTTATGCCCACAGCATCAACGGCAGCAGCGCTGAAGGTTATAACAGTCAGGCCACACTGAATGTGACCTTCTGA Protein sequence : MQTHRHEIQGTTEPHVRNFHQPDLRHCNPSPAGIHICGYRLFIHPHSDKEMLMKRHLNTSYRLVWNHITGAFVVASELAR ARGKRAGVAVALSLAAATSLPALAADSVVPAGETVNGGTLINHDRQFVSGTADGMTVSTGLELGADSDNNTGGQQIARGG TARNTRVTANGLQDVMAGGSTSDTVISTGGGQNLRGKASGTVLNGGDQWIHAGGRASGTVINQDGYQTIKHGGLVTGTIV NTGAEGGPDSENVSTGQMVGGIAESTTINKNGRQVIWSSGIARDTLIYTGGDQTVHGEAHNTRLEGGNQYVHKYGLALNT VINEGGWQVVKAGGTAGNTTINQNGELRVHAGGEASDVTQNTGGALVTSTAATVTGTNRLGAFSVVEGKADNVVLENGGR LDVLSGHTATRTLVDDGGTLDVRNGGTATAVSMGNGGVLLADSGAAVSGTRSDGTAFRIGGGQADALMLEKGSSFTLNAG DTATDTTVNGGLFTARGGSLAGTTTLNNGATFTLAGKTVNNDTLTIREGDALLQGGALTGNGRVEKSGSGTLTVSNTTLT QKAVNLNEGTLTLNDSTVTTDIIAHRGTALKLTGSTVLNGAIDPTNVTLTSGATWNIPDNATVQSVVDDLSHAGQIHFTS ARTGKFVPTTLQVKNLNGQNGTISLRVRPDMAQNNADRLVIDGGRATGKTILNLVNAGNSGTGLATTGKGIQVVEAINGA TTEEGAFVQGNMLQAGAFNYTLNRDSDESWYLRSEERYRAEVPLYASMLTQAMDYDRILAGSRSHQTGVNGENNSVRLSI QGGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGY MNLTHTSSGLWADIVAQGTRHSMKASSDNNDFRARGRGWLGSLETGLPFSITDNLMLEPRLQYTWQGLSLDDGKDNAGYV KFGHGSAQHVRAGFRLGSHNDMTFGEGTSSRAPLRDSAKHSVRELPVNWWVQPSVIRTFSSRGDMRVGTSTAGSGMTFSP SQNGTSLDLQAGLEARVRENITLGVQAGYAHSINGSSAEGYNSQATLNVTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66200.1 | hypothetical protein | Virulence | PAI III 536 | Protein | 0.0 | 92 |
| SF2991 | NP_708765.1 | outer membrane fluffing protein | Not tested | SHI-1 | Protein | 0.0 | 90 |
| sap | AAK00474.1 | Sap | Not tested | SHI-1 | Protein | 0.0 | 90 |
| aidA | ADD91708.1 | AidA | Not tested | PAI-I AL862 | Protein | 0.0 | 86 |
| flu | CAI43838.1 | antigen 43 | Not tested | LEE | Protein | 0.0 | 86 |
| Z1651 | NP_287154.1 | adhesin | Not tested | TAI | Protein | 0.0 | 58 |
| Z1211 | NP_286746.1 | adhesin | Not tested | TAI | Protein | 0.0 | 58 |
| unnamed | AAL08472.1 | putative autotransporter | Not tested | SRL | Protein | 0.0 | 57 |
| unnamed | CAE85197.1 | antigen43 protein orthologue | Not tested | PAI V 536 | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| c1273 | NP_753187.1 | antigen 43 | VFG1675 | Protein | 0.0 | 92 |
| c1273 | NP_753187.1 | antigen 43 | VFG0655 | Protein | 0.0 | 90 |
| c1273 | NP_753187.1 | antigen 43 | VFG1063 | Protein | 0.0 | 57 |
