Gene Information

Name : focC (c1241)
Accession : NP_753155.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : F1C periplasmic chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 1189406 - 1190101 bp
Length : 696 bp
Strand : +
Note : Escherichia coli K-12 ortholog: b4316; Escherichia coli O157:H7 ortholog: z5914

DNA sequence : 
ATGATGAAGCACATGCGTATATGGGCCGTTCTGGCATCATTTTTAGTCTTTTTTTATATTCCGCAGAGCTATGCCGGGGT
TGCTCTGGGGGCCACCCGTGTGATTTACCCTGAAGGGCAAAAACAGGTACAACTGGCGGTAACAAATAATGATGATAAAA
GTAGTTACCTTATTCAGTCATGGATTGAAAATGCTGAGGGAAAAAAGGATGCCCGGTTTGTAATTACTCCTCCGTTATTT
TCCATGCAGGGAAAGAAAGAGAATACCCTGAGAATTATTGATGCCACAAACGGACAGATGCCGGAAGACAGGGAAAGTTT
GTTCTGGGTGAATGTCAAGGCCATCCCGGCCATGGATAAGGCGAAAACCGGCGAGAATTATCTGCAGTTTGCAATTGTCA
GCAGAATTAAACTGCTCTACCGTCCACAGGGACTGGTTATTCCGCCAGAACAGGCACCGGGTAAATTAGAGTTCACCCGT
GAAAACGGAGGGCTGACTCTGTTTAATCCGACGCCGTATTATCTGACAGTGACTGACTTAAAGGCCGGAAATAAAAGTCT
TGAAAACACCATGGTACCCCCACAGGGAAAGGTCACTGTGAATATCCCTGGAGGATACACCGGAGGAGATATTACTTATA
AAACAATTAACGATTATGGTGCTCTGACTGAACAGGTGAAGGGTGTTGTGAAGTAA

Protein sequence : 
MMKHMRIWAVLASFLVFFYIPQSYAGVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENAEGKKDARFVITPPLF
SMQGKKENTLRIIDATNGQMPEDRESLFWVNVKAIPAMDKAKTGENYLQFAIVSRIKLLYRPQGLVIPPEQAPGKLEFTR
ENGGLTLFNPTPYYLTVTDLKAGNKSLENTMVPPQGKVTVNIPGGYTGGDITYKTINDYGALTEQVKGVVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-106 99
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-70 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
focC NP_753155.1 F1C periplasmic chaperone VFG0911 Protein 7e-107 100
focC NP_753155.1 F1C periplasmic chaperone VFG1644 Protein 1e-106 99
focC NP_753155.1 F1C periplasmic chaperone VFG0875 Protein 8e-71 66
focC NP_753155.1 F1C periplasmic chaperone VFG0445 Protein 1e-48 50
focC NP_753155.1 F1C periplasmic chaperone VFG0455 Protein 2e-38 42