Gene Information

Name : c1235 (c1235)
Accession : NP_753149.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1185274 - 1185786 bp
Length : 513 bp
Strand : +
Note : Escherichia coli O157:H7 ortholog: z1634

DNA sequence : 
GTGCAAATAACCGAAGCCTTAATTTCAGAGCCGGGAGACATCCGGCGTTTTGTTCAGCAGGCGGTGGACCACTGGCCGCA
TTTGCTGGCATTTTACTTCACACTCCATTCGGCAGAAGGAAACATCAACGGGCAACAGATTCATGCATTCTGTACTGCCT
TTTACCGACAGGTGCAAGAACATATTACTGAGCGTAATCACACTGCCAGTCCAGCACCGCCGGTGGTATTACGCTGGTTG
CGGGAACAACATGGAGGAGCAACAATACGATGCCTGTTGCTGCTCAGCCAGGCGAGCATTTGCCATCTGCGGGTCAGTGC
CACAGTTGATGAAGAATGTTCGCAAGTGGTGGATTTACTGCAGCAGGCCTGGCGGGGGATAAACGCTGGCGGACAATGTC
GGGTGGAAAGGTGTTTTCGGGTTACCCGGCCTGATACATCAGAGCAATACGTTGCGTTAAAAACAGCTGTTCAGTCTCTG
ATGCCACTGGTTATTGCAACAATTATCCGGTGA

Protein sequence : 
MQITEALISEPGDIRRFVQQAVDHWPHLLAFYFTLHSAEGNINGQQIHAFCTAFYRQVQEHITERNHTASPAPPVVLRWL
REQHGGATIRCLLLLSQASICHLRVSATVDEECSQVVDLLQQAWRGINAGGQCRVERCFRVTRPDTSEQYVALKTAVQSL
MPLVIATIIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1194 AAT48702.1 hypothetical protein Not tested PAI II 4787 Protein 7e-67 99
z1194 CAC43420.1 hypothetical protein Not tested PAI III 536 Protein 1e-63 96
Z1194 NP_286729.1 hypothetical protein Not tested TAI Protein 7e-61 78
Z1634 NP_287137.1 hypothetical protein Not tested TAI Protein 7e-61 78
unnamed CAD42059.1 hypothetical protein Not tested PAI II 536 Protein 5e-61 78
ECO111_3777 YP_003236112.1 hypothetical protein Not tested LEE Protein 6e-47 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c1235 NP_753149.1 hypothetical protein VFG1638 Protein 5e-64 96
c1235 NP_753149.1 hypothetical protein VFG1578 Protein 2e-61 78