Gene Information

Name : c1234 (c1234)
Accession : NP_753148.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1184358 - 1184828 bp
Length : 471 bp
Strand : -
Note : Escherichia coli O157:H7 ortholog: z1633

DNA sequence : 
ATGAGTTGCTATATGAAAATATACTGGACAAGAAAAAGCATTCCTGAACATTCAGCACTTCCACCTTCATTAAGAAAGAA
AAATTTTACTGACGCATATAATGCTGCATCTTCCCATATCGAATACTGGATAGGTGCTGGCGTCTCATTTATCTCGATGA
TGATTTTATTCAGAGTATATGATTTTCTTTTACCCGCCCAAGATACTTTCCCGGGTGATATCATCAGAAGTTTATGTGTT
GTGTGTCCATCCATATTAATCTGGTTTCAGTTTTCGGTATATGTCATGAGGAAATATTACAGACATATTCTGGAACGAGG
TAAGGAAACCGAAACCATTTCAGAAAGGTTGATACGTGAGGCTGATACACGAGAATATGAACTATGGCGTCCGGTCCATC
GTTTTTTCTCCATTGTTTTTCTCATTATTCTATTAGTTTGCATTCATTCACTGATAACAACTATAAAATAA

Protein sequence : 
MSCYMKIYWTRKSIPEHSALPPSLRKKNFTDAYNAASSHIEYWIGAGVSFISMMILFRVYDFLLPAQDTFPGDIIRSLCV
VCPSILIWFQFSVYVMRKYYRHILERGKETETISERLIREADTREYELWRPVHRFFSIVFLIILLVCIHSLITTIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1193 CAC43419.1 hypothetical protein Not tested PAI III 536 Protein 2e-69 98
Z1193 NP_286728.1 hypothetical protein Not tested TAI Protein 4e-66 95
Z1633 NP_287136.1 hypothetical protein Not tested TAI Protein 4e-66 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c1234 NP_753148.1 hypothetical protein VFG1637 Protein 7e-70 98