Gene Information

Name : c1218 (c1218)
Accession : NP_753135.1
Strain : Escherichia coli CFT073
Genome accession: NC_004431
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3464
EC number : -
Position : 1170358 - 1170861 bp
Length : 504 bp
Strand : -
Note : Residues 1 to 167 of 167 are 96.40 pct identical to residues 373 to 539 of 539 from GenPept.129 : >gb|AAL57569.1|AF453441_53 (AF453441) transposase [Escherichia coli]

DNA sequence :
ATGGTGGTCCGGGGGTTTACAGGCAGTGAAACCATTGTCAGGGATGCTATTGCCAAATGGCGTAAAGGCTGGAACCCACC
GGTTACTACTGCCGTCAGACTTCCTTCAATGTCCCGGGTAAGGCGCTGGTTGATGCCCTGGAGAATAATCAGGGATGAAG
AAAATTATGCTTCCCGATTTATTAGTCTGATGTGTGAAAAAGAACCGGAGCTGAAAATAGCGCAGCAACTGGCACTCGAG
TTCTACCGTATTCTGAAAACCCAAAATAAATCACAGCTAAGTAGCTGGTTCACTCGAGTCCACGAAAGCGGTTCAGCAGA
ATTTCGGCGCGTGGCGGCGGGGATGGAAGCTGATGCTGCAGCTATATGTGAGGCAATCAGTAGCCGCTGGAGTAATGGTG
TTGTCGAAGGTCATGTAAATCGCCTGAAGATGCTAAAACGCCAGATGTATGGTAGAGCCGGATTTGAACTACTCAGGCAG
AGGGTCATGAGTCCACTGGCATGA

Protein sequence :
MVVRGFTGSETIVRDAIAKWRKGWNPPVTTAVRLPSMSRVRRWLMPWRIIRDEENYASRFISLMCEKEPELKIAQQLALE
FYRILKTQNKSQLSSWFTRVHESGSAEFRRVAAGMEADAAAICEAISSRWSNGVVEGHVNRLKMLKRQMYGRAGFELLRQ
RVMSPLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2971 NP_708745.1 hypothetical protein Not tested SHI-1 Protein 5e-67 97
unnamed AAK00462.1 unknown Not tested SHI-1 Protein 3e-67 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
c1218 NP_753135.1 hypothetical protein VFG0633 Protein 1e-67 97